Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1220 |
Symbol | |
ID | 5868980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1375518 |
End bp | 1376072 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546320 |
Product | phage protein, putative |
Protein accession | YP_001667464 |
Protein GI | 167032233 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0370127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0000602761 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGCTGA GTTGGCGTAT CGCCTTGCTG GCCGTTGCAC TCGGGCTCTA TGTGGGCGGT CGTGGCGCCT GGACGTGGCA GGCCAGCGAG TACGGTCGGC AGCTTGCTGA TCAGGCCGCT GATTCCATTC GGCAGCTGGC CGACAAGGAT CGAGCCTATG GCCGCGAGCG TGAAGAGGCT GCAGCTGCAG CATTGAAGCA GTTGGCGGAG CAGAAGACTC AGCGACAAGC CCTGGAGATT CGCCTGCAGG AGCAGGGCAA AACACATTGG CAGGAGATGA ACGATGCTCA AAAAACTCAA GATCGCCTGC GTGACCAGCT TGCTACCGCT GATCTGCGGT TGTCAGTCCT TGTCGACGCC GGAGCCTTTG CCACCCCGGG TGGTGACGGT GGGGTGCGAG AAACCGCCGG CACCGGAAGC CTGGTACATG GCGCCGTACG CGCCCAACTT GACCCAGCGC ATGCTCAACG AATTGTCGCC ATCACAGACG AGGGCGACCG GGGGCTGATT GCACTGAAGG CCTGTCAGGC CTACGTGCGC GAAGTCACCA AGTAA
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Protein sequence | MSLSWRIALL AVALGLYVGG RGAWTWQASE YGRQLADQAA DSIRQLADKD RAYGREREEA AAAALKQLAE QKTQRQALEI RLQEQGKTHW QEMNDAQKTQ DRLRDQLATA DLRLSVLVDA GAFATPGGDG GVRETAGTGS LVHGAVRAQL DPAHAQRIVA ITDEGDRGLI ALKACQAYVR EVTK
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