Gene PputGB1_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1220 
Symbol 
ID5868980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1375518 
End bp1376072 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content62% 
IMG OID641546320 
Productphage protein, putative 
Protein accessionYP_001667464 
Protein GI167032233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0370127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0000602761 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGCTGA GTTGGCGTAT CGCCTTGCTG GCCGTTGCAC TCGGGCTCTA TGTGGGCGGT 
CGTGGCGCCT GGACGTGGCA GGCCAGCGAG TACGGTCGGC AGCTTGCTGA TCAGGCCGCT
GATTCCATTC GGCAGCTGGC CGACAAGGAT CGAGCCTATG GCCGCGAGCG TGAAGAGGCT
GCAGCTGCAG CATTGAAGCA GTTGGCGGAG CAGAAGACTC AGCGACAAGC CCTGGAGATT
CGCCTGCAGG AGCAGGGCAA AACACATTGG CAGGAGATGA ACGATGCTCA AAAAACTCAA
GATCGCCTGC GTGACCAGCT TGCTACCGCT GATCTGCGGT TGTCAGTCCT TGTCGACGCC
GGAGCCTTTG CCACCCCGGG TGGTGACGGT GGGGTGCGAG AAACCGCCGG CACCGGAAGC
CTGGTACATG GCGCCGTACG CGCCCAACTT GACCCAGCGC ATGCTCAACG AATTGTCGCC
ATCACAGACG AGGGCGACCG GGGGCTGATT GCACTGAAGG CCTGTCAGGC CTACGTGCGC
GAAGTCACCA AGTAA
 
Protein sequence
MSLSWRIALL AVALGLYVGG RGAWTWQASE YGRQLADQAA DSIRQLADKD RAYGREREEA 
AAAALKQLAE QKTQRQALEI RLQEQGKTHW QEMNDAQKTQ DRLRDQLATA DLRLSVLVDA
GAFATPGGDG GVRETAGTGS LVHGAVRAQL DPAHAQRIVA ITDEGDRGLI ALKACQAYVR
EVTK