Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1145 |
Symbol | |
ID | 5868904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1300188 |
End bp | 1300970 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641546244 |
Product | methionine aminopeptidase |
Protein accession | YP_001667389 |
Protein GI | 167032158 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCA ACATCAAGAC CGCAGAAGAC ATCGAGAAGA TGCGCATCGC CGGCCGCCTG GCCGCCGACG TGCTGGAAAT GATCGAGGAA CACGTCAAGC CCGGTGTTAC CACCGAAGAG CTCGACCGCC TGTGCCATGA CTATATCGTC AACGTCCAGC AGGCCATCCC GGCGCCGCTC AACTACAAGG GCTACCCGAA GTCGATCTGC ACCTCGATCA ACCATGTGGT CTGCCATGGC ATCCCCAACG ACAAACCGCT CAAGGACGGT GACACGCTGA ACATCGACGT CACCGTGATC AAGGACGGCT ACCACGGCGA TACCAGCCGC ATGTTCCACG TCGGTAACGT GCCGGTATGG GCCGAGCGCC TGTCCAAGGT TACCCAGGAG TGCATGTACA AGGCCATCGA GCTGGTCAAG CCGGGCTGCC GCCTGGGCGA TATCGGCGAA GTGATCCAGA AGCACGCGGA AAAGAACGGC TTCTCCGTGG TGCGCGAGTT CTGCGGCCAC GGCATCGGCA AGGTGTTCCA CGAAGAGCCG CAGATCCTGC ACTACGGCCG CGCCGGCACC GGCATGGAGC TTAAAGAAGG CATGACCTTC ACCATCGAGC CGATGATCAA CCAGGGCAAG GCCGACACCA AGGTGCTGGG CGACGGCTGG ACTGCCATTA CCAAGGATCG CAAGCTTTCA GCCCAGTGGG AACACACCCT GGTGGTGACC GCGACCGGCT ACGAGATTTT CACCCTGCGC AAGGACGACA CCATCCCGCG CACTTCGGCC TGA
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Protein sequence | MTVNIKTAED IEKMRIAGRL AADVLEMIEE HVKPGVTTEE LDRLCHDYIV NVQQAIPAPL NYKGYPKSIC TSINHVVCHG IPNDKPLKDG DTLNIDVTVI KDGYHGDTSR MFHVGNVPVW AERLSKVTQE CMYKAIELVK PGCRLGDIGE VIQKHAEKNG FSVVREFCGH GIGKVFHEEP QILHYGRAGT GMELKEGMTF TIEPMINQGK ADTKVLGDGW TAITKDRKLS AQWEHTLVVT ATGYEIFTLR KDDTIPRTSA
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