Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1136 |
Symbol | |
ID | 5868895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1289750 |
End bp | 1290559 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546235 |
Product | UBA/THIF-type NAD/FAD binding protein |
Protein accession | YP_001667380 |
Protein GI | 167032149 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.761745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACAG AAGATCCACG CTTCGCCGGC GTTGCCCGGC TGTACGGCGA CCAGGGGCTG CAACGCCTGG GCCAGGCCCA TGTGGCGGTG GTCGGTATTG GCGGAGTGGG CTCCTGGGTG GCCGAAGCGT TGGCCCGCAG TGGCGTGGGC GAAATCACCC TGTTCGACCT GGACGATGTC TGCGTCAGCA ACACCAACCG CCAGGCCCAT GCCCTGGAAG GCCAGGTGGG GCGGCCCAAG GTTGAGGTCA TGGCCGAACG CCTGCGAGCG ATCAACCCGG CGTGCAAGGT GCATGCGGTG GCTGACTTCG TCACCCGCGA GACCATGGTC GAGTACATCC ATGAGCAGCT GGATTGCGTG ATCGACTGCA TCGACAGCGT GATGGCCAAG GCGGCGCTGA TCGCCTGGTG CCGGCGGCGC AAGATCGCGA TTGTCACCAC CGGTGGTGCG GGTGGGCAAA TCGACCCGAC GCAGATCCAG ATCGCCGACC TGAACAAGAC CTTCAACGAC CCGCTCGCTT CGCGGGTGCG CTCAACCCTG CGCCGCGACT ACAACTTCTC GCGCAATGTC AGCCGCAACT ATGGCGTACC GTGCGTGTTC TCCAGCGAAC AGCTGCGTTA CCCCAAGGGC GATGGCAGCG TTTGCCTGCA GAAAAGCTTC GTGGGTGAGG GCGTAAGGCT GGACTGCGCG GGTGGCTTTG GCGCGGTGAT GATGGTGACC GCGACCTTTG GCATGGTGGC AGCCAGCAAG GCGATCGAGA AGCTGGTGGC CGGTGCGCGG CGCCCTTCGG AGCGTATCAA ACCTGAGTAA
|
Protein sequence | MSTEDPRFAG VARLYGDQGL QRLGQAHVAV VGIGGVGSWV AEALARSGVG EITLFDLDDV CVSNTNRQAH ALEGQVGRPK VEVMAERLRA INPACKVHAV ADFVTRETMV EYIHEQLDCV IDCIDSVMAK AALIAWCRRR KIAIVTTGGA GGQIDPTQIQ IADLNKTFND PLASRVRSTL RRDYNFSRNV SRNYGVPCVF SSEQLRYPKG DGSVCLQKSF VGEGVRLDCA GGFGAVMMVT ATFGMVAASK AIEKLVAGAR RPSERIKPE
|
| |