| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1066 |
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| Symbol | |
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| ID | 5868825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1213686 |
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| End bp | 1215062 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546165 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001667310 |
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| Protein GI | 167032079 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAA ACCTGACCGA CCGCCTGTCA CAGACGCTGC GCCATGTCAC CGGCAAGGCC
AAGCTGACCG AAGACAACAT CAAGGACACG CTGCGCGAAG TGCGCATGGC CCTGCTCGAG
GCCGACGTTG CCCTGCCGGT GGTCAAGGAT TTCGTCAACA GCGTCAAGGA ACGTGCGGTC
GGCACCGAAG TCTCGCGTAG CCTGACCCCG GGCCAGGCAT TCGTGAAGAT CGTCCAGGCC
GAGCTGGAAA GCCTGATGGG CGCGGCCAAC GAAGACCTCG CACTGAACGC CGCCCCGCCT
GCCGTGGTGC TGATGGCCGG CCTGCAAGGC GCCGGTAAGA CCACCACCGC CGGCAAGCTG
GCGCGCTTCC TTAAAGAGCG CAAGAAAAAG AGCGTGATGG TGGTGTCCGC CGACGTTTAT
CGCCCGGCGG CGATCAAGCA GCTGGAAACC CTGGCCAACG ACATCGGTGT CACCTTCTTC
CCGTCCGATA TCAGCCAGAA GCCGGTGGCC ATTGCCGAAG CGGCCATCCG TGAAGCCAAG
CTGAAGTTCA TCGACGTGGT CATCGTCGAC ACCGCCGGCC GTTTGCACAT CGACGCCGAC
ATGATGGACG AGATCAAGGC GCTGCACGCC GCGGTCAAGC CAATCGAGAC GCTGTTCGTG
GTCGACGCCA TGACCGGCCA GGACGCCGCC AACACCGCCA AGGCCTTTGG CGAGGCGCTG
CCGCTGACCG GTGTGGTACT GACCAAGGTC GACGGTGACG CCCGTGGTGG TGCTGCGCTG
TCGGTGCGTG CCATCACCGG CAAGCCGATC AAGTTCATCG GTATGGGTGA GAAGACCGAG
GCTCTCGAGC CGTTCCACCC CGATCGCGTC GCTTCGCGCA TTCTCGGCAT GGGTGACGTG
CTCAGCCTGA TCGAGCAGGC CGAGCAGACC ATCGACAAGG CCAAGGCCGA CAAGCTGGCC
AAGAAGCTGA AGAAGGGCAA GGGCTTCGAC CTCGAGGACT TCCGCGACCA GCTGCAACAA
ATGAAGAACA TGGGCGGCCT CGGTGGCCTG ATGGACAAGC TGCCGAGCAT CGGCGGGGTC
AACCTGTCGC AGATGGGCAA CGCCCAGGGC GCCGCCGAGA AGCAGTTCAA ACAGATGGAA
GCGATCATCA ACTCCATGAC CCCGGCCGAG CGCCGTGACC CTGACCTGAT CAGCGGTTCG
CGCAAGCGCC GTATCGCCCT GGGTTCCGGT ACCCAGGTGC AGGACATCGG CCGCTTGATC
AAGCAGCACA AGCAGATGCA GAAGATGATG AAAAAATTCT CTGCCAAAGG CGGCATGGCC
AAGATGATGC GCGGCCTGGG CGGGATGCTG CCAGGCGGCG GCATGCCGAA GCTGTAA
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| Protein sequence | MFENLTDRLS QTLRHVTGKA KLTEDNIKDT LREVRMALLE ADVALPVVKD FVNSVKERAV
GTEVSRSLTP GQAFVKIVQA ELESLMGAAN EDLALNAAPP AVVLMAGLQG AGKTTTAGKL
ARFLKERKKK SVMVVSADVY RPAAIKQLET LANDIGVTFF PSDISQKPVA IAEAAIREAK
LKFIDVVIVD TAGRLHIDAD MMDEIKALHA AVKPIETLFV VDAMTGQDAA NTAKAFGEAL
PLTGVVLTKV DGDARGGAAL SVRAITGKPI KFIGMGEKTE ALEPFHPDRV ASRILGMGDV
LSLIEQAEQT IDKAKADKLA KKLKKGKGFD LEDFRDQLQQ MKNMGGLGGL MDKLPSIGGV
NLSQMGNAQG AAEKQFKQME AIINSMTPAE RRDPDLISGS RKRRIALGSG TQVQDIGRLI
KQHKQMQKMM KKFSAKGGMA KMMRGLGGML PGGGMPKL
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