Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1036 |
Symbol | |
ID | 5868796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1183796 |
End bp | 1184557 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641546137 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_001667282 |
Protein GI | 167032051 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGTG CCATGGACCC GACGGCCAGC ATGCCGTTGA CCGAACACCT GCGCGACCTG CGCAAACGCC TGGTGCGTTG TCTGGGGTTG GTGGCATTGG TGTTCGCCGG CCTGTTCCCC TTCGCCCAAA CGCTGTACAC GCTCATCTCC GAGCCGCTTC GGCGCTTTTT GCCGGAAGGC GCGAGCATGA TCGCCACCAG CGTCACCTCG CCGTTTTTGA CGCCGTTCAA GCTGACAGCG ATGTGCGCAC TGTTCGTGGC CATGCCGCTG CTGCTGCATC AGGCCTGGGG CTTTCTGGCA CCGGGGTTGT ACCGCCGTGA ACGGCGCATT GCCCTGCCGC TGCTGGTGTC GAGCATCGTG CTGTTCTATG CCGGCATGGC GTTCGCGTTC TTCCTGGTGT TTCCGATGAT GTTCGGCTTT TTTGCCAGCG TGACACCGGA CGGTGTGGCG ATGATGACTG ACATCAGCCA GTACCTGGAC TTTATCCTGG CGCTGTTTTT GGCATTCGGG CTGGCATTCG AGATCCCGGT GGCGACCTTC ATCGTGGTCT GGGTGGGGTT GGCCGATGTG GCCACATTGC GGCGCAGCAG GCCCTACGTG ATCGTCGGGT GCTTTGTGGT GGGGATGATC CTGACGCCGC CGGATGTGTT TTCGCAGACG ATGCTAGCGG TGCCGATGTG GATACTGTTC GAGGTGGGAT TGCTGGCTTG TGCCTGGTTG AAGCGGCCTG AGCCCGGCAA GGAGATTGTG GCCGGCTTAT AG
|
Protein sequence | MSSAMDPTAS MPLTEHLRDL RKRLVRCLGL VALVFAGLFP FAQTLYTLIS EPLRRFLPEG ASMIATSVTS PFLTPFKLTA MCALFVAMPL LLHQAWGFLA PGLYRRERRI ALPLLVSSIV LFYAGMAFAF FLVFPMMFGF FASVTPDGVA MMTDISQYLD FILALFLAFG LAFEIPVATF IVVWVGLADV ATLRRSRPYV IVGCFVVGMI LTPPDVFSQT MLAVPMWILF EVGLLACAWL KRPEPGKEIV AGL
|
| |