| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0988 |
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| Symbol | |
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| ID | 5868748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1124204 |
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| End bp | 1125265 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546089 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001667234 |
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| Protein GI | 167032003 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.127526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGC TCGACCGCTA CATCGGCCAG AGCGTGCTGA TGGCCATTCT GGCTGTGCTG
GGGATCATCC TCGGCCTGGC CTCGCTGTTC GCCTTCATCG ATGAGATGAG CGACCTGAGT
GACACCTACA CGGTGATGGA AGCGGGCAAC TTCGTCCTGC TTACCGCACC ACGGCGGCTG
TACGAAATGC TGCCGATGGC GGCATTGATC GGCTGCCTGA TCGGCCTGGG TAGCCTGGCC
AGCAGCAGCG AACTGACCAT CATGCGTGCG GCGGGTGTTT CCATCGGCCG TATCGTCTGG
GCGGTGATGA AGCCGATGCT GGTGCTGATG CTGGTTGGCC TGCTGATTGG CGAGTACGTG
GCACCGGTGA CCGAGAACAA GGCCCAGGCC GACCGTTCCC TGGCCCAGGG TGGCGGTGAA
GCGCAAAGCT CCAAACGCGG CATGTGGCAC CGCCAGGGCG AGGAATACGT GCACATCAAC
GCCGTGCAGC CCAACGGCCT GCTGCTGGGT GTAACCCGCT ACCGCTTCGA CAACGAGCGC
AAGATCGTCA CCTCGAGCTT CGCCCGCCGC GCGCAGTACC AGGACGACCA CTGGCTGCTG
GCTGACGTGC GCACCACCTA CTTCCGTGGC GACCACACCG AAGTGGTCAA CGCGCCGCAG
GAGCGCTGGG ACGTTTCGCT CACGCCAGAA CTGCTCAATA CCGTGATTCT GGCGCCGGAG
TCGCTGTCGA TCACCGGGCT GTGGGACTAC ATCCACTACT TGTCCGACCA GGGCCTGAAC
AACGCCCGTT ATTGGCTGGC GTTCTGGACC AAGGTGCTGC AGCCGATGGT GACGGCGGCA
CTGGTGCTGA TGGCGATCTC GTTCATCTTT GGCCCGCTGC GTTCGGTGAC GCTTGGCCAG
CGCGTGTTCA CCGGTGTACT GGTGGGCTTC GTGTTCCGCA TCGGCCAGGA CCTGCTGGGG
CCTTCGAGCC AGGTGTTCGG CTTCCCGCCG CTGCTGGCGG TGGTGATCCC GGCAGGCATC
TGTGCGCTGG CGGGTGTGTG GTTGTTGCGC CGAGCGGGTT GA
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| Protein sequence | MAKLDRYIGQ SVLMAILAVL GIILGLASLF AFIDEMSDLS DTYTVMEAGN FVLLTAPRRL
YEMLPMAALI GCLIGLGSLA SSSELTIMRA AGVSIGRIVW AVMKPMLVLM LVGLLIGEYV
APVTENKAQA DRSLAQGGGE AQSSKRGMWH RQGEEYVHIN AVQPNGLLLG VTRYRFDNER
KIVTSSFARR AQYQDDHWLL ADVRTTYFRG DHTEVVNAPQ ERWDVSLTPE LLNTVILAPE
SLSITGLWDY IHYLSDQGLN NARYWLAFWT KVLQPMVTAA LVLMAISFIF GPLRSVTLGQ
RVFTGVLVGF VFRIGQDLLG PSSQVFGFPP LLAVVIPAGI CALAGVWLLR RAG
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