| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0987 |
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| Symbol | |
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| ID | 5868747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1123096 |
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| End bp | 1124211 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546088 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001667233 |
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| Protein GI | 167032002 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.480786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCGTCT TTCGTTATCT GTCCCGCGAG GTCCTGGTGA CCTTGAGCGC CGTCAGCGCT
GTGCTGCTGG TGATCATCAT GAGCGGGCGC TTCATCAAGT ACCTGGCCCA GGCTGCCCAA
GGCGTGCTCG ATCCGGGTGT GCTGTTCCTG ATCATGGGCT TCCGCCTGCC GGGCTTCCTG
CAGCTGATCC TGCCGCTGGG GCTGTTCCTC GGCATTCTCC TGGCTTACGG GCGCCTGTAC
CTGGAAAGCG AGATGACCGT ACTGTCGGCC ACGGGCATGA GCCAGCAGCG CTTGCTGGGC
CTGACCATGG CGCCGGCTGC CCTGGTCGCC CTGCTGGTGG CCTGGCTGAG CCTGAGCCTG
GCACCGCTGG GCGTAGCCCA GGTGCAGCAG ATCATCAGCC AGCAGGATGC CCTGACCGAG
TTCGACACCC TGGTGCCGGG CCGCTTCCAG ACATTACGTG ATGGCTCGCG GGTAACCTAC
ACCGAGCAAC TGTCGGATGA CCGCATCAAC CTGGCTGGGG TGTTCATCTC CGAGAAGCGC
TTCAACCAGG ACAAGACCAA GGACCGTGCC CCGTCGGTGC TGGTCGCCGA GAAAGGCCAC
CAGGAGATCC AGGCCGACGG CAACCGCTAC CTGGTCCTGG AGAACGGCTA CCGCTACGAC
GGCAACCCGG GCCAGGCCGA CTACCGTGCT ATCAAGTACG ACACTTACGG CGTGCTGCTG
CCCAAACCGG AAGTCGCCGA GGAGGTAACC GAGCGCGAAG CTATCCCTAC CTCCGAGCTG
ATTGGCAAGA AAGGCCTGCG TGAGCGCGCC GAACTGCAAT GGCGGATATC GCTGCCGATC
CTGGTGTTTG TCGTTACCTT GTTGGCGGTG CCGCTGTCAC GGGTCAACCC GCGACAAGGC
CGCTTCCTGA AGCTGTTGCC AGCAATTCTT CTGTACATGG CCTACCTGAC AATGCTGATT
TCCGTACGCG GCGCCCTCGA GAAGGGCAAA CTGCCGATCG CCCTGGGCAT GTGGTGGGTC
CACGGCCTGT TCCTGCTGAT CGGCCTTGGT CTGATGTACT GGGAGCCTCT GCGCCTCAAA
CGCGCCGCTC GCCGTGCGGA GGTGGCCCAT GGCTAA
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| Protein sequence | MIVFRYLSRE VLVTLSAVSA VLLVIIMSGR FIKYLAQAAQ GVLDPGVLFL IMGFRLPGFL
QLILPLGLFL GILLAYGRLY LESEMTVLSA TGMSQQRLLG LTMAPAALVA LLVAWLSLSL
APLGVAQVQQ IISQQDALTE FDTLVPGRFQ TLRDGSRVTY TEQLSDDRIN LAGVFISEKR
FNQDKTKDRA PSVLVAEKGH QEIQADGNRY LVLENGYRYD GNPGQADYRA IKYDTYGVLL
PKPEVAEEVT EREAIPTSEL IGKKGLRERA ELQWRISLPI LVFVVTLLAV PLSRVNPRQG
RFLKLLPAIL LYMAYLTMLI SVRGALEKGK LPIALGMWWV HGLFLLIGLG LMYWEPLRLK
RAARRAEVAH G
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