| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0971 |
|---|
| Symbol | |
|---|
| ID | 5868731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1106014 |
|---|
| End bp | 1107279 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641546072 |
|---|
| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_001667217 |
|---|
| Protein GI | 167031986 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
|---|
| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC TGATTATTAC TGGCGGCGCT CGTCTTGACG GCGAGATCCG CATTTCGGGC
GCGAAAAACG CAGCCCTGCC GATTCTGGCG GCGACCCTGC TGGCCGATGG CCCGGTCACC
GTGGGCAACC TGCCACACCT GCACGACATC ACCACCATGA TCGAGCTGTT CGGGCGCATG
GGCATCGAGC CTGTGATCGA CGAAAAGCTG TCGGTGGAGA TCGACCCACG TACCATCAAG
ACCCTGGTTG CGCCTTACGA ACTGGTCAAG ACCATGCGCG CCTCGATCCT GGTGCTGGGC
CCGATGGTTG CCCGATTCGG CGAAGCCGAA GTGGCCTTGC CTGGCGGCTG CGCCATTGGT
TCGCGCCCGG TCGACCTGCA CATCCGTGGC CTTGAGGCCA TGGGTGCGAA GATCGAAGTA
GAAGGCGGCT ACATCAAGGC CAAGGCACCT GAAGGTGGCC TGCGTGGCGC GCACTTCTTC
TTCGACACCG TGAGCGTGAC CGGTACCGAG AACATCATGA TGGCCGCAGC CCTGGCCAAG
GGCCGCAGCG TGCTGCAGAA CGCCGCGCGC GAGCCTGAAG TGGTTGACCT GGCCAACTTC
ATCAACGCCA TGGGCGGCAA CGTCCAGGGC GCTGGCACCG ATACCATCAC CATCGATGGC
GTCGAGCGCC TGCACTCGGC CAACTACCGT GTGATGCCGG ACCGTATCGA AACCGGTACC
TACCTGGTCG CCGCCGCCGT GACCGGTGGC CGCGTCAAGG TCAAGGACAC CGACCCGACC
ATCCTTGAAG CCGTACTGGA AAAACTCAAG GAAGCCGGCG CTGACATCAA CACTGGCGAA
GACTGGATCG AGCTGGACAT GCACGGCAAG CGGCCCAAAG CCGTCAACCT GCGTACGGCC
CCGTACCCGG CGTTCCCGAC CGACATGCAG GCGCAGTTCA TCTCGCTGAA CGCCATTGCC
GAAGGCACTG GCGCGGTGAT CGAGACCATC TTCGAAAACC GCTTCATGCA CGTTTACGAA
ATGCACCGCA TGGGCGCGCA GATCCAGGTC GAAGGCAACA CTGCCATCGT CACCGGCGTC
AAGGCGCTGA AAGGCGCGCC GGTCATGGCC ACCGACCTGC GAGCTTCCGC CAGCCTGGTA
TTGTCGGCGC TGGTTGCCGA AGGCGATACG TTGATCGATC GCATCTACCA CATCGACCGT
GGTTACGAGT GTATCGAAGA GAAACTGCAG ATGCTCGGCG CAAAAATCCG CCGCGTACCG
GGCTAA
|
|---|
| Protein sequence | MDKLIITGGA RLDGEIRISG AKNAALPILA ATLLADGPVT VGNLPHLHDI TTMIELFGRM
GIEPVIDEKL SVEIDPRTIK TLVAPYELVK TMRASILVLG PMVARFGEAE VALPGGCAIG
SRPVDLHIRG LEAMGAKIEV EGGYIKAKAP EGGLRGAHFF FDTVSVTGTE NIMMAAALAK
GRSVLQNAAR EPEVVDLANF INAMGGNVQG AGTDTITIDG VERLHSANYR VMPDRIETGT
YLVAAAVTGG RVKVKDTDPT ILEAVLEKLK EAGADINTGE DWIELDMHGK RPKAVNLRTA
PYPAFPTDMQ AQFISLNAIA EGTGAVIETI FENRFMHVYE MHRMGAQIQV EGNTAIVTGV
KALKGAPVMA TDLRASASLV LSALVAEGDT LIDRIYHIDR GYECIEEKLQ MLGAKIRRVP
G
|
|---|
| |