Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0937 |
Symbol | gatB |
ID | 5868697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1074829 |
End bp | 1076274 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641546038 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_001667183 |
Protein GI | 167031952 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.75121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATGGG AAGTTGTGAT CGGGCTGGAA ATCCACACTC AGCTCGCCAC CCAGTCGAAG ATTTTCTCCG GCAGCGCCAC CACCTTTGGC TCCGAGCCGA ACACCCAGGC CAGCCTGGTT GACCTGGGCA TGCCCGGTGT ACTGCCGGTG CTGAACCAGG AAGCCGTGCG CATGGCGTGC ATGTTCGGCC TGGCCATCGA CGCCGAAATC GGCAAGCGCA ACGTGTTCGC GCGCAAGAAC TACTTCTACC CGGACCTGCC CAAGGGCTAC CAGATCAGCC AGATGGACCT GCCGATCGTC GGCAAGGGCC ACCTGGACAT CGCCCTGGAA GACGGCACCA TCAAGCGCAT CGGCGTAACC CGTGCGCACC TGGAAGAAGA CGCCGGCAAG AGCCTGCACG AAGACTTCAG CGGCTCCACC GGCATCGACT TGAACCGTGC CGGCACGCCA CTGCTGGAAA TCGTCTCCGA GCCTGACATG CGCAGCGCCA AGGAAGCCGT GGCTTACGTC AAGGCGATCC ACGCGCTGGT ACGTTACCTG GGCATCTGCG ATGGCAACAT GGCCGAAGGT TCGCTGCGTT GCGACTGCAA CGTGTCGATC CGCCCGAAAG GCCAGACCGA GTTCGGCACC CGCTGCGAGA TCAAGAACGT CAACTCGTTC CGCTTCATAG AGCGCGCGAT CAACAGCGAA ATCCAACGCC AGATCGACTT GATCGAAGAC GGCGGCAAGG TGGTGCAGGA AACCCGCCTG TACGACCCGA ACAAAGACGA AACCCGCTCC ATGCGCAGCA AGGAGGAAGC CAACGACTAT CGCTACTTCC CCGACCCGGA CCTGCTGCCG GTGGTGATCG AGGACAGCTT CCTCGACACC ATTCGCGCCG GCCTGCCAGA GCTGCCGCCA CAGAAAGTCG AGCGTTTCCA GAGCCAGTAC GGCCTGTCGG CATACGACGC CAACGTGTTG GCCTCCAGCC GCGAACAGGC AGATTACTTC GAAGAAGTAG TGAAGATCGG TGGCGACGCC AAGCTGGCGG CCAACTGGGT CATGGTCGAA CTGGGCAGCC TGCTGAACAA GCTGGGTGTC GAAATCGACC AGGCGCCGGT CAGCGCCGCG CAACTGGGCG GCATGCTGCT GCGCATTCGC GACAACACCA TCAGCGGCAA AATCGCCAAG ACCGTGTTCG AGGCCATGGC CGCCGGTGAA GGCGATGCCG ACAGCATCAT CGACAGCAAG GGCCTGAAAC AGGTTACCGA CACCGGTGCG ATCGACAAGA TGCTCGACGA AATGCTGGCA GCCAATGCCG AGCAGGTCGA ACAGTACCGC GCAGCCGATG AGGCCAAACG CGGCAAGATG TTCGGCTTCT TCGTCGGCCA GGCCATGAAA GCTTCCAAAG GCAAGGCCAA CCCGGGGCAG GTGAACCAAT TGCTCAAAGC CAAGCTCGAA GGGTGA
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Protein sequence | MQWEVVIGLE IHTQLATQSK IFSGSATTFG SEPNTQASLV DLGMPGVLPV LNQEAVRMAC MFGLAIDAEI GKRNVFARKN YFYPDLPKGY QISQMDLPIV GKGHLDIALE DGTIKRIGVT RAHLEEDAGK SLHEDFSGST GIDLNRAGTP LLEIVSEPDM RSAKEAVAYV KAIHALVRYL GICDGNMAEG SLRCDCNVSI RPKGQTEFGT RCEIKNVNSF RFIERAINSE IQRQIDLIED GGKVVQETRL YDPNKDETRS MRSKEEANDY RYFPDPDLLP VVIEDSFLDT IRAGLPELPP QKVERFQSQY GLSAYDANVL ASSREQADYF EEVVKIGGDA KLAANWVMVE LGSLLNKLGV EIDQAPVSAA QLGGMLLRIR DNTISGKIAK TVFEAMAAGE GDADSIIDSK GLKQVTDTGA IDKMLDEMLA ANAEQVEQYR AADEAKRGKM FGFFVGQAMK ASKGKANPGQ VNQLLKAKLE G
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