| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0903 |
|---|
| Symbol | |
|---|
| ID | 5868663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1033748 |
|---|
| End bp | 1036300 |
|---|
| Gene Length | 2553 bp |
|---|
| Protein Length | 850 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641546004 |
|---|
| Product | flavodoxin/nitric oxide synthase |
|---|
| Protein accession | YP_001667149 |
|---|
| Protein GI | 167031918 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
[COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.127756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00576689 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAGA CGCTGTTCCA ATTGCACTGG TTCTTTGGCA TCACCGCAGG CCTGGTACTG
GCCTTGATGG GCATTACCGG CGCCCTGTAC TCGTTCCAGG AAGAACTGCT GCGTGCGTTC
AATGCCGATG TGCTCAAGGT AGAAGTGCGC GCCGAAGGCG TGCTGCCACC GGCCGAACTG
GTGCAGCGGG TCGAAGCCCA GCAACATGAC AAAGTGTCGA TGCTGTGGGT GGACGTGCGC
GAAGGCAATG CCGCACGCAT CTTCTTCATG CCACCACCGG GCGAACGCCG TGGCGAGCTG
CGCTATGCCG ACCCGTACAC TGGCGAACTA AAAGGCGAAG TAGCCGGGCA AGGCTTCTTC
AATCTCATGC TCAACCTGCA CCGTTTCCTG GCCATGGGCG ACACTGGCCG GCAGATCACC
GGTGCCTGCA CCCTGATGCT GGTGTTCTTC TGCCTGTCCG GCCTGTACCT GCGCTGGCCG
CGCAAGGCGC TGGACTGGCG CACCTGGCTG ACCTTCGACT GGGCCAAGAA AGGCCGTGCC
TTCAACTGGG ACCTGCACGC CGTGGCCGGC ACCTGGTGCC TGCTGTTCTA TCTGCTGTTC
GCCCTGACCG GGCTGTTCTG GTCCTATGAA TGGTACCGCG AAGGCCTGAA CAAGCTGCTG
GCCGACGCGC CAGCAGCCGG CCAGCAGCAG AAGCGCGGCG AAGGCCGTGG CCGCCACGGG
CCGCAGAAAG TCGACAAGAA TGCCCCGCCG CTGGTGGTCG ACTACGACGC CATCTGGTCC
AACCTCAAGG ACGCCGCAGG CCCAGGCCTT GCCGCCTACA ACCTGCGCCT GCCACCGGTT
GGCGGCCAGC CGGCCAACCT GTTCTACCTG CTGGACAACG CCGATCACCC TCGCGCCTTC
AACACCCTGG TGCTGGACCC GACCACCGGC CAGGTGAAAA ACCACGACCG CTACACCGAC
AAATCCTTCA AGGCCCAGCT GCTGCAAAGC GTCTACGCCC TGCACGTCGG TGAGTACTTT
GGCCTGCCGG GGCGCATCAT CGTCACCATC GCCAGCCTGA CAATGCCGTT GTTCTTCGTC
ACCGGCTGGC TGCTGTACCT CGACCGTCGC CGCAAAAAGC GCCAGGTACG TGAGGCCCGT
GGCAACGTCG CCAGTAGCAA CGGCAGTGGC GATAGCTGGC TGATCGGTTT TGCCAGCCAA
AGCGGCTTTG CCGAACAGCT GGCCTGGCAG AGTGCCGGGC AATTGCAAGC CGCCGGCCTG
CCAGTGCAAG TGCGCGCCCT GGCCGAGTTG GGCGAAAACG ACCTGCGCCA GGCTCGCCGT
GCGCTGTTCG TGGTCAGCAC GTTCGGCGAT GGCGAAGCCC CCGACAGCGC CCGCGCCTTC
GAGCGCAAGG TGCTCGGCCA GCCCTGGGTA CTGAACGACC TCAGCTATGC CCTGCTCGCC
CTCGGTGATC GCCAGTACCC GCACTTCTGC GGCTTTGCTC GACGCCTGCA GGCGTGGCTG
GGTGAGCGCG GTGCCAGCAG CGCCTTCAGC CCGGTGGAAG TGGACAACGC CGACCAGGCT
GCCCTGCAGC AGTGGCAGCA GGAACTGGCA CAACTAACCG GTGCCCAGCC GGTAGCTGCA
TGGCAACCGC CGAGCTTTGG CAACTGGTCG CTGGTGCACC GCGAACTGCT CAACCCGGGC
AGTCAGGGCC AACCGGTGTA CCTGCTTGGC CTGCGCCCAG AGGCGCCTGC CAGCTGGGAA
GCCGGTGACC TGGTGGAGAT ACTGCCGCTC AATGGTCAGC CACGGATCGA CGCGTTCCTC
AAGGGCATGG CACTGGACTC CAACACCCAG GTGCAAGTGA ATGGCCTGAG CGAAACACTG
GCCCAAGCCC TGGCTGGCCG CCAGCTGCCA ACACGCCGCG ATCACCTGAT CGGCTTGCAG
CCGCAAGCGC TGATCGACGC ACTGGTGCCA ATCGGCAGCC GCGAATACTC CATTGCCTCG
ATCGCCAGTG ATGGTGTGCT GGAGCTGATC GTGCGCCAGG AACGCCACGC CGACGGCCAC
CTGGGCCTGG GTTCCGGTTG GCTGACCGAG TACTTGCCGT TGAACGGCAC ATTGAGCCTG
CGCCTGCGAA GGAACAGTGG CTTCCACCTG CCCGAAACCG CTGCCCCACT GATCCTGATC
GGCAACGGCA CAGGCATTGC CGGCCTGCGC AGCTTGATCC GGGCCCGGGC AAATGCAGGT
GAGCAGCGCA ACTGGCTGCT GTTTGGCGAG CGTAACCGAG CGCATGACCT GTTGTGTGGG
GATGAACTGC AGGGCTGGCT GGACAGCGGC GACCTGGCAC GGCTGGACCT GGCGTTTTCG
CGGGATCAGG CCGAGAAGGT GTATGTGCAG GATGTGTTGC TGCAGCAGGC TGACGCGTTC
AAACGCTGGG TCGCTGAGGG TGCCTGTGTG TATGTCTGCG GCAGCCTGCA AGGCATGGCT
GCGGGGGTAG ATGCGGCGCT AAACGGCATG CTTGGGGAAG CCGCTGTGCA GCAACTGATC
GAGGATGGGC GGTATCGGCG GGATGTCTAC TGA
|
|---|
| Protein sequence | MKKTLFQLHW FFGITAGLVL ALMGITGALY SFQEELLRAF NADVLKVEVR AEGVLPPAEL
VQRVEAQQHD KVSMLWVDVR EGNAARIFFM PPPGERRGEL RYADPYTGEL KGEVAGQGFF
NLMLNLHRFL AMGDTGRQIT GACTLMLVFF CLSGLYLRWP RKALDWRTWL TFDWAKKGRA
FNWDLHAVAG TWCLLFYLLF ALTGLFWSYE WYREGLNKLL ADAPAAGQQQ KRGEGRGRHG
PQKVDKNAPP LVVDYDAIWS NLKDAAGPGL AAYNLRLPPV GGQPANLFYL LDNADHPRAF
NTLVLDPTTG QVKNHDRYTD KSFKAQLLQS VYALHVGEYF GLPGRIIVTI ASLTMPLFFV
TGWLLYLDRR RKKRQVREAR GNVASSNGSG DSWLIGFASQ SGFAEQLAWQ SAGQLQAAGL
PVQVRALAEL GENDLRQARR ALFVVSTFGD GEAPDSARAF ERKVLGQPWV LNDLSYALLA
LGDRQYPHFC GFARRLQAWL GERGASSAFS PVEVDNADQA ALQQWQQELA QLTGAQPVAA
WQPPSFGNWS LVHRELLNPG SQGQPVYLLG LRPEAPASWE AGDLVEILPL NGQPRIDAFL
KGMALDSNTQ VQVNGLSETL AQALAGRQLP TRRDHLIGLQ PQALIDALVP IGSREYSIAS
IASDGVLELI VRQERHADGH LGLGSGWLTE YLPLNGTLSL RLRRNSGFHL PETAAPLILI
GNGTGIAGLR SLIRARANAG EQRNWLLFGE RNRAHDLLCG DELQGWLDSG DLARLDLAFS
RDQAEKVYVQ DVLLQQADAF KRWVAEGACV YVCGSLQGMA AGVDAALNGM LGEAAVQQLI
EDGRYRRDVY
|
|---|
| |