| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0882 |
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| Symbol | |
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| ID | 5868642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1015047 |
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| End bp | 1015802 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545983 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001667128 |
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| Protein GI | 167031897 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00955273 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCTGCAAA ATATTCGTGT TGTTCTGGTC AATACCAGCC ACCCCGGCAA CATCGGCGGC
GCTGCGCGTG CCATGAAAAA CATGGGCTTG TCGCGTCTGG TGCTGGTGCA GCCGAAAGAA
TTCCCCGCCG TGGATGCCAG CGCCCGTGCA TCGGGCGCCG ACGATGTGCT GGATAACGCC
CTGGTGGTCG ACAGCCTCGA ACAGGCACTG GTCGGCTGCA ACCTGGTGAT GGGCACCAGC
GCCCGCGAGC GCAGCATTCC CTGGCCGTTG ATCGGCCCGC GCGAGTGCGG GGCCAAGGCG
GTGGAGCATG CCAATGGCGG CGAGGAGATC GCCCTGGTGT TCGGGCGTGA GCACGCCGGC
CTGACCAACG AAGAACTGCA GCGATGTCAC TTCCACGTGC ACATTCCCTC CAACCCCGAC
TTTAGTTCGC TGAACCTGGC CGCTGCTGTG CAGGTGCTCT CTTACGAGGT GCGCATGGCC
TGGCTGGCTG CCGGTGAAGC ACCCGAAAAA GTCGAGAAGG TTGACGCCAC CGAGCTGGCG
ACCATGGACG AAATGGAGCT GTTCTACGAC CACCTGGAGA AAACCCTGGT GGGCATCGGC
TTCCTCGACC CCGAAAAGCC CAAGCACCTG ATGCCGCGCC TGCGCCGGCT GTATGGGCGG
GTGGCGGTCG AGCGTTCGGA AATGAGCATT TTGCGCGGCA TCCTGACCGA GACCCAGAAA
GTGGTCCGGG GCGAGCCGCA TAAACGGAAG GACTGA
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| Protein sequence | MLQNIRVVLV NTSHPGNIGG AARAMKNMGL SRLVLVQPKE FPAVDASARA SGADDVLDNA
LVVDSLEQAL VGCNLVMGTS ARERSIPWPL IGPRECGAKA VEHANGGEEI ALVFGREHAG
LTNEELQRCH FHVHIPSNPD FSSLNLAAAV QVLSYEVRMA WLAAGEAPEK VEKVDATELA
TMDEMELFYD HLEKTLVGIG FLDPEKPKHL MPRLRRLYGR VAVERSEMSI LRGILTETQK
VVRGEPHKRK D
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