Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0876 |
Symbol | tgt |
ID | 5868636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1008952 |
End bp | 1010085 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641545977 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001667122 |
Protein GI | 167031891 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.321375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGCA CCTGTCGAAT GTCCTTCGAA CTGCTGGCCA CCGACGGCAA GGCCCGTCGT GGTCGCATCA CCTTCCCACG CGGTACCGTG GAAACCCCGG CGTTCATGCC GGTGGGCACC TATGGCACGG TCAAGGGCAT GCTGCCACGC GATATCGAGG CCATTGGTGC CGAGATGATC CTCGGCAACA CCTTCCACCT GTGGCTGCGC CCAGGTACCG AGGTGATCAA GAAGCACAAC GGCCTGCACG ATTTCATGCA GTGGAAAGGC CCGATCCTCA CCGATTCCGG TGGCTTCCAG GTGTTCAGCC TGGGTGCCAT GCGCAAGATC AAGGAAGAGG GCGTGACCTT CGCCTCGCCG GTCGATGGCT CGAAGGTGTT CATGGGCCCT GAAGAGTCGA TGCAGGTGCA ACGTGACCTG GGCTCGGACG TGGTGATGAT CTTCGACGAG TGCACCCCGT ACCCGGCCGA GCACGATGTG GCGCGCACCT CCATGGAGCT GTCGCTGCGC TGGGCTCAGC GTTCGAAGAA CGCTCACGCC GACAACACCG CGGCGTTGTT CGGCATCGTT CAGGGCGGCA TGTACCAGGA CCTGCGCATG CGCTCGCTCG AAGGCCTGGA AAACATCGGT TTCGATGGCC TGGCCATCGG TGGCCTGTCG GTGGGCGAGC CCAAGCACGA AATGATCAAG GTACTGGACT ACCTGCCGGG CCAGATGCCT GCTGACAAAC CTCGTTACCT TATGGGGGTA GGCAAACCGG AAGATCTCGT TGAGGGTGTG CGCCGCGGCG TCGACATGTT CGACTGCGTG ATGCCGACGC GTAACGCGCG CAACGGTCAT CTGTTCGTCG ATACAGGGGT GATCAAGATC CGCAATGCGT TCCATCGCCA TGATGAATCG CCGCTGGATC CGACCTGTGA CTGCTACACC TGCACCAACT TCTCGCGCGC CTATCTGCAT CACCTGGACA AGTGCGGCGA AATGCTGAGC AGCATGCTGA ATACCATCCA CAACTTGCGC CATTACCAGC GCTTGATGGC CGGTTTACGC GAGGCTATTC AACAGGGTAA ATTGGCCGCC TTTGTCGACG CCTTCTACGC CAAGCGCGGG CTTCCTGTTC CGCCCTTGGA CTGA
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Protein sequence | MSRTCRMSFE LLATDGKARR GRITFPRGTV ETPAFMPVGT YGTVKGMLPR DIEAIGAEMI LGNTFHLWLR PGTEVIKKHN GLHDFMQWKG PILTDSGGFQ VFSLGAMRKI KEEGVTFASP VDGSKVFMGP EESMQVQRDL GSDVVMIFDE CTPYPAEHDV ARTSMELSLR WAQRSKNAHA DNTAALFGIV QGGMYQDLRM RSLEGLENIG FDGLAIGGLS VGEPKHEMIK VLDYLPGQMP ADKPRYLMGV GKPEDLVEGV RRGVDMFDCV MPTRNARNGH LFVDTGVIKI RNAFHRHDES PLDPTCDCYT CTNFSRAYLH HLDKCGEMLS SMLNTIHNLR HYQRLMAGLR EAIQQGKLAA FVDAFYAKRG LPVPPLD
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