Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0865 |
Symbol | |
ID | 5868624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 997772 |
End bp | 998626 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545965 |
Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
Protein accession | YP_001667111 |
Protein GI | 167031880 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAAAC GCCCCCTGGC GCTCGCCGCC GGCCTTGTGT TGTCTTGCTG CGCCGTTGTC GTTCAGGCCG CTGAAACCTT GCGGGTCAGC GCCATACCCG ACGAAGCACC GACCGAATTG CAGCGCAAGT TCAAGCCCTT GGGCGAATAC CTGGCCAAGC AGTTGGGCAT GGACGTGAAG TTCGTACCGG TGGCCGATTA CCCGGCGGTG GTCGAGTCGC TGGCCGCGGA CCGCCTCGAC CTGGCCTGGC TGGGCGGCTT CACGTTCGTC CAGGTGCACT TGAAGGACCC AACCGCCACA CCGCTGGTGC AGCGTGAACA GGACGCGCAG TTCACCTCCA AGTTCATCAC TGCCAACCCC GACGTGAAAA GCTTGGCGGA CCTTAAGGGC AAGTCGTTTG CTTTTGGTTC CATTTCGTCC ACGTCGGGCA GCCTGATGCC GCGTTACTTC ATGCTCAAGC AAGACAACAT CAAGCCTGAA GAGTACTTCA GCCGCGTGGC CTATTCCGGC GCCCATGACG CCACCGTGGC CTGGGTACAG GCTGGCAAGG TCGATGGTGG CGTGCTCAAC GCCAGTGTGT GGCAGAAGCT GGTGGATGCA GGCAAGGTCG ATACCAGCAA GGTGAAAGTG TTCGCCACCA CCCCGACCTA CTTCGACTAC AACTGGACCG TGCGTGGCAA CATGGACCCG GCGTTGAAAG AGAAGATCAA GCAAGCCTTC CTTGGCCTCG ACCCGGCCAA CCCGGAGCAC AAGGCGATCC TCGACCTGCA GGCCGCCAGC CGCTTCATCG AAACCAAGCC TGAGAACTAC GTGGGCACCG AACAAGCCGC ACGCGAGGCC GGCCTGCTCA AGTGA
|
Protein sequence | MLKRPLALAA GLVLSCCAVV VQAAETLRVS AIPDEAPTEL QRKFKPLGEY LAKQLGMDVK FVPVADYPAV VESLAADRLD LAWLGGFTFV QVHLKDPTAT PLVQREQDAQ FTSKFITANP DVKSLADLKG KSFAFGSISS TSGSLMPRYF MLKQDNIKPE EYFSRVAYSG AHDATVAWVQ AGKVDGGVLN ASVWQKLVDA GKVDTSKVKV FATTPTYFDY NWTVRGNMDP ALKEKIKQAF LGLDPANPEH KAILDLQAAS RFIETKPENY VGTEQAAREA GLLK
|
| |