Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0863 |
Symbol | |
ID | 5868622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 995487 |
End bp | 996599 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545963 |
Product | tRNA 2-selenouridine synthase |
Protein accession | YP_001667109 |
Protein GI | 167031878 |
COG category | [R] General function prediction only |
COG ID | [COG2603] Predicted ATPase |
TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCCG ACTGCACCGA CTTCCGTCAG CTATTCCTCG ACGACGTGCC GATGATGGAC ATGCGTGCCC CCGTCGAATT CGCCAAGGGC GCCTTCCCCG GTGTCGTCAA CCTGCCGCTG ATGAACGACC AGGAGCGGCA AAAGGTCGGC ACCTGCTACA AACAGCAGGG CCAGGCCGCC GCCATCGCCC TTGGCCACCA GCTGGTCAGC GGCACCACCA AACAGGCACG CATGGACGCC TGGGTGGCGT TCACCCAGGC CAACCCGCAA GGTTACCTGT ACTGTTTCCG TGGTGGCCTG CGATCGCAGA TCGTGCAAGG TTGGCTACGC GATGAGGCGG GCATTCAGTA CCCCCGTGTC AAAGGTGGCT ACAAGGCCAT GCGCACCTTC TTGCTGGAGA CCACCCAACA GGCAGTGGCG CAATGCGATT TCGTATTGCT GGGCGGCCTG ACGGGTACCG GCAAGACCGA TGTATTGCAC CAGTTGGACA ACGTGCTCGA CTTGGAAGGC CACGCCAACC ATCGCGGTTC CAGCTTCGGC AAGCGCGCCA CTGCGCAGCC GGCGCAGATC GATTTCGAAA ACCAGCTGGC CATCGATGTA CTGAAAAAAC GCGCCCGCGG CTGCGAGCAG TTCGTGCTGG AAGATGAAGG CCGCATCGTC GGCAGTTGCA CTGTGCCGCT GGAGTTGTAC CAAGGCATGC AGCAATACCC GCTGGTGTGG CTTGAGGACA GCTTTGCCAA CCGCGTTGAG CGCATCTTGC GCGACTACGT GGTCAACCTG AGTGCCGAGT TTATCGCCGT GCATGGCGAG GAAGATGGCC GCCGCTTGTT CGCCGAGCGC ATGCTGCAAA GCATGGCCAA CATCTACAAG CGCTTGGGTG GCGAACGTTA TCAGCGGCTG TCGGAGATCC TGCGCCTGGC CTTGGAAGAA CAGCAGCGCA GCGGTGCTGT GGACCTGCAC CGGGGCTGGA TCGAAGGTTT GCTGAACGAG TACTACGACC CGATGTATGC CTACCAGCGT GCGGCGAAGG CCGAGCGCAT CGAGTTTGCC GGGGATGCAG TGGAAGTGCG CGAGTACCTG AAGGCACGGG CGCGGCGACA ACCTCACCAT TAA
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Protein sequence | MRPDCTDFRQ LFLDDVPMMD MRAPVEFAKG AFPGVVNLPL MNDQERQKVG TCYKQQGQAA AIALGHQLVS GTTKQARMDA WVAFTQANPQ GYLYCFRGGL RSQIVQGWLR DEAGIQYPRV KGGYKAMRTF LLETTQQAVA QCDFVLLGGL TGTGKTDVLH QLDNVLDLEG HANHRGSSFG KRATAQPAQI DFENQLAIDV LKKRARGCEQ FVLEDEGRIV GSCTVPLELY QGMQQYPLVW LEDSFANRVE RILRDYVVNL SAEFIAVHGE EDGRRLFAER MLQSMANIYK RLGGERYQRL SEILRLALEE QQRSGAVDLH RGWIEGLLNE YYDPMYAYQR AAKAERIEFA GDAVEVREYL KARARRQPHH
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