| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0753 |
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| Symbol | |
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| ID | 5868511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 857393 |
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| End bp | 858907 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545852 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001666999 |
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| Protein GI | 167031768 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.13209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACT GCTGCTATGG CCTGGGGTTG CTGATGCTGC TGGCTGGTTG CACCCAGGTC
GGCCCCGATT TCGAAAAGCC CCAGGCCCCG TGGCTGGACG GCTGGAGCAC ACCCATGCTG
GAACAGGCAG GGCGTAGCGC CACCACCCCT GACCTGCGCC AGTGGTGGGC GGTGTTTGCC
GACCCGATGC TGGACGCGCT GATTGCCGAG GCCGACGCCA ACAACACCAA CCTGCGCGTG
GCTGGCCTGC GTATCGCTGA AGCTCGTGCG CAATTGGCCA TCGTGCAGAC CGGGCGTTAT
CCACAGCTGC AGCAACTGAG CGCGCAGAGC CTGTACCTGA AGCAGAACCA GTCCGGTACT
GCCACCGCCC GTGATTCGGT GTTCTGGCAA TCCAGCGTCG GCTTCGACAT TGGCTGGGAG
ATCGACTTCT GGGGCCGCTT CAGTCGCGCC ATCGAAAGCG CAGATGCCCT CTACTTCGCC
TCCCAGGCCA ACTACGCCGA CGCCATGTTG CTGCTGCGTG CGCAAGTGGC CGACACTTAC
TTTGCCCTGC GTACCGCCGA GGCGCGGCTG GATATCGCGC AAGAGAACGC CAAGCGCCAG
GCGCGTAGCC TGGAGATCAC CGAGCGGCTT TTCCGCCACG GCGAACATGA CGAACTCGAC
TGGCAGCAGG CGCGTACTCA ATACCTGGCG ACCCTGGCCA CCATCCCTGA ATTCGAGAAT
CAGCTCAACG CCCTGCGCAA TGTGTTGTGC TCATTGCTGG GCCGCCCGCC CGGGCCGCTG
CCGCAGTTGC AGGCCGGTCA TGGCCAGCTG CCGCTGCCAG AGCGCGCAAT ATTGCAGGAC
GTGCCTGCCA ACCTGCTGCA GCGCCGGCCA GACATTCGCG CCGCCGAGCA GGCAGTGGCG
GCGCAGTCGG CGCTGGTCGG GGTGGCCGAG GCCGATCTTT ATCCACAACT GAGCCTGCTT
GGCAGTATCG GCTGGACCTT TCTTTCGGCC AGTCACCTGC CCAACACTTT CGACCTGGCG
GCAGGGCCGA GCCTGATCTG GAACCCGTTC GACTACGGCC GGCGCAAAAA TGCCGTGCGG
GTGGAAGATG CCCGCTTGCA GCAACTGATC GAGCTGTACC AACAGGGTGT GCGCGAAGCC
GCCCGTGAAG CCGACGACGC TGCCAGCGGT CTGGTGCGCT CGCTGCAAAG TGCAACCATT
CGCGACCAGG CTTCCCAGGC GGCGCAACGC TCGCTGACCC TGGCCAGCTC GCAGTACCGC
GAAGGCTTCG CCGACTTCCA GCGGGTGCTC GATGCCCAGC AACTGCTGTT GCAGCAACAG
GATGGTTACC TGGTCAGCCG TGGCAACGCG GTCAGCAGCC TGGTGACGTT GTACAAGGCC
CTGGGCGGAG GCTGGGACAC CCGCCGCGCG CCGATCGACC CGGCCACCCG CCAGCACATG
CAGCAACGCA CCGACTGGGG CGAGCTGCTC GACGTGCCAG CCTCCAGCGC ACATGCACAA
GGTGAAACCG AATGA
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| Protein sequence | MPNCCYGLGL LMLLAGCTQV GPDFEKPQAP WLDGWSTPML EQAGRSATTP DLRQWWAVFA
DPMLDALIAE ADANNTNLRV AGLRIAEARA QLAIVQTGRY PQLQQLSAQS LYLKQNQSGT
ATARDSVFWQ SSVGFDIGWE IDFWGRFSRA IESADALYFA SQANYADAML LLRAQVADTY
FALRTAEARL DIAQENAKRQ ARSLEITERL FRHGEHDELD WQQARTQYLA TLATIPEFEN
QLNALRNVLC SLLGRPPGPL PQLQAGHGQL PLPERAILQD VPANLLQRRP DIRAAEQAVA
AQSALVGVAE ADLYPQLSLL GSIGWTFLSA SHLPNTFDLA AGPSLIWNPF DYGRRKNAVR
VEDARLQQLI ELYQQGVREA AREADDAASG LVRSLQSATI RDQASQAAQR SLTLASSQYR
EGFADFQRVL DAQQLLLQQQ DGYLVSRGNA VSSLVTLYKA LGGGWDTRRA PIDPATRQHM
QQRTDWGELL DVPASSAHAQ GETE
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