| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0701 |
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| Symbol | |
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| ID | 5868458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 797879 |
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| End bp | 800215 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545799 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001666947 |
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| Protein GI | 167031716 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0300951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGT TTTCTTTGCT GTGCGCGCTG CTCCCAGGGC TGGCCCTGGC CGAGCCGCGT
GAGTTCGACA TCGCCCCGCA ACCCCTGGCC AGTGCGCTCA ACCGTCTGGC CGCGCAGGGC
GGACTGCAGG TGATCTTCGA TGGCAATTTG GTGCAGGGCA AGAGCAGCCG AGGCGTCACT
GGGCGGCATG AACCGGAAGC GGCGCTGTCC GAGCTACTGC AGGGCAGTGG CCTGACCTGG
CGCGCCACCG GCAGCACCAG CGTCACCTTG GAGCCCGCTG CGCAATCGTC TGGCGCGCTG
GAGCTTGGGG CCACGTCGAT CGTTGGCCAG GCCTACAGCT CCGTCAGCCC GGACGATGGC
TACGTGGCCA AGCGCTCCTC GGTCGGCAGC AAGACCGACA CCCCGTTGAT CGAGACCCCA
GCCTCGGTCT CGGTCATTAC CCGCGAGCAG ATCGAGGCGC AGCAACCCAA GACCGTGGCC
CAGGCGCTGC GCTACACCCC AGGCGTCAAC ACCGAACTGG CTGGCCCGCA GTTCGTCGTC
GATCAATTGT CCATCCGCGG TTTCCAGCAG GGCACCGGGC GCATGCTGCG CGATGGCACC
CGTACCTTCC TGCCGGAGTT TCTCGGCTGG GACGCGCCAG AACCGTATGG CCTGGAGCGC
ATCGAGGTAC TGCGTGGTGC CAGCTCGGTG TTGTACGGCG CCTCGGACCC AGGCGGGCAG
ATCAACCTGG TGAGCAAGCG CCCCACCCAG CAGCCCTTGC ACGAAGTGCA GTTGCAGGCC
GGCAACCTGA ACTATCAGCA AGGCGCCTTC GACCTGGGTG ATGCGCTGGA TGACGAAGGC
ATCTGGAGTT ATCGCCTGAC CGGCCTGTTC CGCGAAACCG ATGCCCAGAC CGATCACATC
ACCAACCGCC GGCAGTACAT CGCCCCGGCG CTCAGCTATC GGCCCAGTGC CAATACCGAG
TTCACCCTGC TGGGTGAGTA TCAGCGTCAG ACTGGTAACT TCGCCAACTC GCTTCCCGCC
AGCGGCACCG TGTTCCGCGA TGCGCGTGGC CGGCTGGACC GTGACACCTA CGTGGGCGAC
AGCGCCTACG ACTTCATGAC CAACGAAAAG ACCTCGTTGG GCTATGTGTT CGAACATCAC
TTCGATGAAA CCTGGACCCT GCGCCAGAAT GTGCGCTACA GCAACTACCG CCAGGCCAGC
AGCGAAATCG CCTTGTTCGG CCCAGTCGGC GGTGGGCAGT ATTCGCGTTA CAGCGACCAG
CGCAAGGGCG ATGGCCGTTT GTTTACGGTG GACACCCATG TTCAGGCCGA CTTCGCGACC
GGGCCGGTGG AGCACACTTT GCTGAGTGGG GTGGACTACA ACAACGGCAA GTTCGACCAG
CAGCAGTCAC TGGACTTCAT CCTGCAAAGC TTCGACCCGT TCCAGCCGGT GTACGGTCAG
CCGCTGAGCA CAGTGCCGTT CAGCTTTGCC AGCTATGAGC AGAAGCTGTC CCAGACCGGC
GTGTACCTGC AGGACCAGCT GCGTATCGAC AACTGGGTGT TGCTGCTGGG CGGGCGCTAC
GACTGGGCGG TCAACCAGAA GGACGATCGC GCCCCGCAAA CTCAGAAGGA CGAGAAATTC
AGCGGCCGTG CCGGGTTGGT CTACCTGTTC GATAATGGCC TGGCGCCGTA CGTCAGCTAC
AGCGAGTCGT TCCTGCCGGT GATGGGCATT ACCGCCGATG GCACCCAGCT CGACCCGGAA
ACCGGCAAAC AGTACGAGCT GGGCCTGAAA TACGAGCCAC CGGGCAGCAA CAGCCTGTAC
ACCATCGCGG TGTTCGAGCT GACCAAGCAG AACGTCACCG AGACCATCAA CGGCTTCAGC
CGCCAGGAAG GCGAAGTACG CTCACGCGGT GTCGAGCTGG AGGCCAGAAC CGAGCTGGCG
CCGGGATTCA ACCTGATTGG CAGCTACACC TGGAACGATG TCGAAGTTAC CCAGTCCGAG
CGCGGCACCC AGGGCAATAC GCCGTTCCGT ACGCCGGAGC ACATGGCCTC GCTGTGGGCG
GACTACCAGT TGCAAGGTGG ATCGCTGAAC GGGCTGCGGC TGGGCGCTGG CACCCGTTAT
GTGGGTAGCA CCTTCGGCGA TGCGCAGAAC AGCTTCAAGG TCGACAGCTA CGTGCTGGTG
GATGCGATGG TCAGCTACGA GTTGGGCAAG CTGGACGCTT TGCTCAAAGG CGTGGAGCTG
GCGCTCAATG CCAGCAACCT GTTCGACAAG GAGTATGTGG CCGGCTGTTT CAGCGATATG
GGCTGCCAGT ATGGGCAGCA GCGCACGGTT TACGGGACGG TGACGTATAA CTGGTGA
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| Protein sequence | MTSFSLLCAL LPGLALAEPR EFDIAPQPLA SALNRLAAQG GLQVIFDGNL VQGKSSRGVT
GRHEPEAALS ELLQGSGLTW RATGSTSVTL EPAAQSSGAL ELGATSIVGQ AYSSVSPDDG
YVAKRSSVGS KTDTPLIETP ASVSVITREQ IEAQQPKTVA QALRYTPGVN TELAGPQFVV
DQLSIRGFQQ GTGRMLRDGT RTFLPEFLGW DAPEPYGLER IEVLRGASSV LYGASDPGGQ
INLVSKRPTQ QPLHEVQLQA GNLNYQQGAF DLGDALDDEG IWSYRLTGLF RETDAQTDHI
TNRRQYIAPA LSYRPSANTE FTLLGEYQRQ TGNFANSLPA SGTVFRDARG RLDRDTYVGD
SAYDFMTNEK TSLGYVFEHH FDETWTLRQN VRYSNYRQAS SEIALFGPVG GGQYSRYSDQ
RKGDGRLFTV DTHVQADFAT GPVEHTLLSG VDYNNGKFDQ QQSLDFILQS FDPFQPVYGQ
PLSTVPFSFA SYEQKLSQTG VYLQDQLRID NWVLLLGGRY DWAVNQKDDR APQTQKDEKF
SGRAGLVYLF DNGLAPYVSY SESFLPVMGI TADGTQLDPE TGKQYELGLK YEPPGSNSLY
TIAVFELTKQ NVTETINGFS RQEGEVRSRG VELEARTELA PGFNLIGSYT WNDVEVTQSE
RGTQGNTPFR TPEHMASLWA DYQLQGGSLN GLRLGAGTRY VGSTFGDAQN SFKVDSYVLV
DAMVSYELGK LDALLKGVEL ALNASNLFDK EYVAGCFSDM GCQYGQQRTV YGTVTYNW
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