Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0647 |
Symbol | |
ID | 5868398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 741125 |
End bp | 742663 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545740 |
Product | integral membrane protein MviN |
Protein accession | YP_001666894 |
Protein GI | 167031663 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0843167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGC TCAAATCCCT GGCTGCAGTA AGCTCGATCA CCATGATTTC GCGGGTGCTG GGCTTCGTCC GCGACACCAT CCTGGCGCGC ATCTTCGGTG CCGGTGTCGC CACCGACGCC TTCTTCATCG CGTTCAAGTT GCCCAACCTG TTGCGGCGGA TCTTCGCTGA AGGTGCATTC TCCCAGGCCT TCGTGCCGAT CCTGGCCGAA TACAAGACCC AGCAGGGCGA GGAGGCGACA CGCACCTTCA TTGCCTACGT CAGCGGCCTG CTGACCCTGG TCCTGGCCCT GGTGACCGCC ATCGGTATCC TGGCGGCGCC CTGGGTGGTG TGGGCGACGG CCCCGGGTTT TGTTGACAGC GCCGAAAAAT ACGAGCTGAC CACCGCCCTG TTGCGAGTGA CCTTTCCTTA TATATTGCTG ATCTCGCTGT CTTCCCTGGC CGGTGCGATC CTCAATACCT GGAACCGTTT CTCGGTACCG GCCTTCACCC CGACCTTGCT GAACGTGGCG ATGATCGCCT TCGCCGTGCT GCTGACACCG TACTTCGACC CGCCGATCAT GGCCTTGGCC TGGGGCGTGC TGGCCGGTGG CCTGGCGCAG TTGCTGTACC AGCTGCCGGC ACTGAAGAAG ATCGGCATGC TCGTGCTGCC GCGCCTGAAC TTAAAGGACG CCGGTGTGTG GCGGGTACTG AAGCAGATGC TGCCGGCGAT TCTCGGGGTG TCGGTGAGCC AGATCTCGTT GATCATCAAC ACCATCTTCG CTTCCTTCCT GGTGGCCGGC TCGGTGTCGT GGATGTACTA CGCCGACCGC CTCATGGAGT TGCCTTCGGG TGTGCTGGGC GTGGCATTGG GCACGATCCT GCTGCCGACC CTGGCCAAGA CCTACGCCAA CAAGGACCGC GAGGAGTACT CGCGGATTCT CGACTGGGGC CTGCGCCTGT GCTTCCTGCT GGTGCTGCCC TGCACCCTGG CGCTGGCCAT TCTTGCCGAG CCACTGACCG TTGCGTTGTT TCAATACGGC AAATTCAGTG CGTTCGATGC GGCCATGACC CAGCGGGCGC TGATGGCCTA TTCCGTGGGC TTGCTGGCGA TCATTCTGGT CAAGGTACTG GCACCCGGCT TCTATGCGCA GCAGAATATT CGCACGCCGG TGAAAATCGC GATCTTCACG CTGGTTTGCA CTCAGTTGTT CAACCTTGCC CTGGTCGGGC CGCTCGCACA TGCCGGCCTG GCATTGGCGA TCAGCCTCGG TGCCTGCCTG AATGCCGGCT TGCTGTTCTG GAAGCTGCGC AGTCAGCAGT TGTTCGAACC TCAGCCAGGC TGGGCAATGT TCCTGCTCAA GCTTGTTTTG GCAGTGGCAC TCATGTCGGC GGTACTGTTG GCGGGCATGC ACTATATGCC GGCCTGGGAG CAGGGCATCA TGCTCGAGCG CTTCCTGCGC CTGGGGGCAT TGATCCTGGC GGGCGTCGTG ACGTATTTCG GCTGCCTGTA CCTGTGCGGC TTCCGGCCTC GGCATTTCGC CCGCAAGGCC TTGCACTAA
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Protein sequence | MNLLKSLAAV SSITMISRVL GFVRDTILAR IFGAGVATDA FFIAFKLPNL LRRIFAEGAF SQAFVPILAE YKTQQGEEAT RTFIAYVSGL LTLVLALVTA IGILAAPWVV WATAPGFVDS AEKYELTTAL LRVTFPYILL ISLSSLAGAI LNTWNRFSVP AFTPTLLNVA MIAFAVLLTP YFDPPIMALA WGVLAGGLAQ LLYQLPALKK IGMLVLPRLN LKDAGVWRVL KQMLPAILGV SVSQISLIIN TIFASFLVAG SVSWMYYADR LMELPSGVLG VALGTILLPT LAKTYANKDR EEYSRILDWG LRLCFLLVLP CTLALAILAE PLTVALFQYG KFSAFDAAMT QRALMAYSVG LLAIILVKVL APGFYAQQNI RTPVKIAIFT LVCTQLFNLA LVGPLAHAGL ALAISLGACL NAGLLFWKLR SQQLFEPQPG WAMFLLKLVL AVALMSAVLL AGMHYMPAWE QGIMLERFLR LGALILAGVV TYFGCLYLCG FRPRHFARKA LH
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