| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0612 |
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| Symbol | |
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| ID | 5868358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 692993 |
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| End bp | 694906 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545700 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001666859 |
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| Protein GI | 167031628 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0473517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAC GACGCACACG CAAAGACGAT GGTAGCCAAT GGACCGTGGC CGACAGCCGC
AGTGTTTATG GCATCCGCCA TTGGGGCGCT GGTTATTTCG CCATCAATGA AGCCGGGCGC
GTCGAAGTGC GCCCCAACGG CCCCAACAGC GCGCCGATCG ACCTGTACGA ACAGGTTGAC
GAACTGCGCC AGAGCGGCCT GTCGCTGCCC TTGCTGGTGC GCTTCCCCGA CATTCTGCAG
GACCGCGTAC GCCAGCTAAC TGGTGCGTTC GATGCCAACA TCGCGCGCCT GGAGTACCAG
AGCCAGTACA CCGCGCTGTA CCCGATCAAG GTCAACCAGC AGGAAGCGGT GGTGGAAAAC
ATCATCGCCA CGCAAAACGT TTCCATTGGC CTGGAAGCCG GCTCCAAACC CGAGCTGCTG
GCCGTACTGG CGCTGGCGCC GAAGGGCGGC ACCATCGTCT GCAACGGCTA CAAGGACCGT
GAGTTCATTC GCCTGGCGTT GATGGGCCAG AAGCTCGGCC ACAACGTGTT CATCGTCATC
GAGAAAGAGT CGGAAGTGGC GCTGGTGATC GAAGAGGCCG CCGAGCTGAA GGTGAAACCG
CAGGTCGGCC TGCGCGTGCG CCTGTCGTCG CTGGCTTCGA GCAAGTGGGC CGATACCGGT
GGCGAAAAGT CCAAGTTCGG TTTGTCTGCC GCCCAGCTGC TCTCTGTAGT ACAGCGCTTC
CGCGATGCAG GCCTGGACCA GGGCATTCGC CTGCTGCACT TCCACATGGG GTCGCAGATC
GCCAACCTGG CTGACTATCA GCACGGTTTC AAGGAAGCCA TCCGTTACTA CGGCGAACTG
CGTGCGCTGG GCCTGCCGGT CGACCACATC GACGTTGGCG GTGGCCTGGG CGTGGACTAC
GACGGCACCC ACTCGCGCAA TGCCAGCTCG ATCAACTACG ACATGGACGA CTACGCCGGC
GTGGTGGTGG GCATGCTCAA GGAGTTCTGC GACGCGCAGG GCCTGCCGCA CCCGCACATC
TTCTCCGAGA GTGGCCGCTC GTTGACAGCG CACCACGCCA TGCTGGTGAT CCAGGTGACC
GACGTCGAGA AACACAACGA CGACGTACCC ACCATCGAGA ACAAGGAAGC CCTGCCCGAG
ACCGTGCAGT GGCTGGTCGA CCTGCTTGGC CCGACCGATA TCGAGATGGT CACCGAGACT
TACTGGCGCG CCACCCACTA TATGGGTGAC GTGGCCGCGC AGTATGCCGA TGGCAAGATC
AGCCTGGGCG AGAAGGCCCT GGCCGAACAG TGCTATTTTG CCGTCTGCCG CCGCCTGCAC
AACTCGCTCA AGGCCCGCCA GCGCTCGCAC CGTCAGGTGC TGGACGAGCT GAACGACAAG
CTGGCCGACA AGTACATCTG CAACTTCTCG GTGTTCCAGA GCCTGCCGGA CACCTGGGCC
ATCGGCCAGG TACTGCCGAT CATCCCGCTG CACCGCCTGG ACGAAGAGCC GATGCGACGT
GCGGTATTGC AGGACCTGAC CTGCGACTCC GACGGCAAGA TCAACCAGTA CGTTGATGAG
CAGAGCATCG AGACCAGCAT GCCGGTGCAT GCGCTGAAGG AGGGCGAGGA CTACCTGCTG
GGCGTGTTCC TGGTCGGTGC CTACCAGGAA ATCCTGGGCG ATATGCACAA CCTGTTCGGC
GACACCGACT CGGTGAACAT CTACCAGAAC GCCGACGGCA GCGTGTACCA CGCCGGTATC
GAGACCCACG ACACCATCGA AGACATGCTG CGCTACGTGC ACCTGTCGCC GGAGGAGTTG
ATGACGCATT ACCGCGACAA GGTGGCCAGC GCCAAGATCA CCGCACGTGA GCGTACCCAG
TTCCTGGATG CCTTGCGCCT TGGGTTGACC CGGTCTTCGT ACTTGTCGTC GTAA
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| Protein sequence | MSVRRTRKDD GSQWTVADSR SVYGIRHWGA GYFAINEAGR VEVRPNGPNS APIDLYEQVD
ELRQSGLSLP LLVRFPDILQ DRVRQLTGAF DANIARLEYQ SQYTALYPIK VNQQEAVVEN
IIATQNVSIG LEAGSKPELL AVLALAPKGG TIVCNGYKDR EFIRLALMGQ KLGHNVFIVI
EKESEVALVI EEAAELKVKP QVGLRVRLSS LASSKWADTG GEKSKFGLSA AQLLSVVQRF
RDAGLDQGIR LLHFHMGSQI ANLADYQHGF KEAIRYYGEL RALGLPVDHI DVGGGLGVDY
DGTHSRNASS INYDMDDYAG VVVGMLKEFC DAQGLPHPHI FSESGRSLTA HHAMLVIQVT
DVEKHNDDVP TIENKEALPE TVQWLVDLLG PTDIEMVTET YWRATHYMGD VAAQYADGKI
SLGEKALAEQ CYFAVCRRLH NSLKARQRSH RQVLDELNDK LADKYICNFS VFQSLPDTWA
IGQVLPIIPL HRLDEEPMRR AVLQDLTCDS DGKINQYVDE QSIETSMPVH ALKEGEDYLL
GVFLVGAYQE ILGDMHNLFG DTDSVNIYQN ADGSVYHAGI ETHDTIEDML RYVHLSPEEL
MTHYRDKVAS AKITARERTQ FLDALRLGLT RSSYLSS
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