| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0591 |
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| Symbol | |
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| ID | 5868337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 667579 |
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| End bp | 669594 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545679 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001666838 |
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| Protein GI | 167031607 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.495015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.162414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCA ACCCTTTCAG TCGCCATGCC CAGCAGGTCC ATAGCGTTGC CCATGGTCGG
GCTGGGGAGG GCGGCAGTGA CCCGTCCATC GCCCGCTCCT GGCTGCGCTG CCTGGAGGAC
TACCACCTCG ACCCTACGGT GATCGAAGCG CCGGTGGTGC TTGAGCATGG GCGCCTGCTG
GAAAGCCGCG AGCGCCTGCG CCAGGTGTTG CAAATTGCCG ACCATGAAAT GAACAGCCTG
CACCAGCAGC TTTCCGGCGC GGGCCACGCA GTGCTGCTGA CCGACGCCCG CGGGGTGATC
CTCAACTGTG TCAGCGCCCC CACCGAGCGG CGTAGCTTCG AGCGTGCCGG GCTGTGGCTG
GGCGCCGACT GGAGCGAGGC GCGCGAGGGC ACCAATGGCA TCGGCACCTG CCTGGTCGAG
CGCCAAGCGC TGACTATCCA CCAGAACGAG CACTTCCGTG GCCGCCACAC CGGCCTGACC
TGCTCGGCCA GCCCAGTGTT CGACCCGCAT GGCGAGTTGC TGGCGGTACT CGACGTGTCC
TCGGCGCGTC CTGACGTATC ACGGCAAAGC CAGTTCCACA CCATGGCGTT GGTCAACCTG
TCGGCGAAGA TGATCGAAAG CTGTTACTTC CTTCGCCATT TCGAGCAGCA ATGGCTGCTG
CGTTTTCACC TGCAGGCCGA GTCGGTCGGT TTGTTCAGCG AAGGCTTGCT GGCGTTCGAC
GGCGATGGGC GCATTTGCGC TGCCAACCAG AGCGCGCTTA ACCTGCTGGG CACTGTGCGG
GGCGGTGTGC TGGGCAAACC ATTGGAGCGA TTTTTTGCCT GTAGCCATGA CGAATTGTTC
AGCCGCGCCA CGCCCGGCGG CAGCACCGCC TGGCCGCTGC GTACCCTGGA CGGCCGCCAG
GTGTTCGCCA GCCTGCGAGG GCAGGCCCGG GCGCCGGTAT GGTCGGTGCC AGCCGCCCAG
CCGCGGCCCG CGTGCGAAGT GGAGCCGCTG GTCTGCCTGC TCGACCCGGC GTTGCAAAAC
GACTTCCGGC GCAGCGTGCG GGTGTTCGAG CGCGATGTGC CCTTGCTGCT GCGCGGCGAG
ACCGGTTGTG GCAAGGAGGC CTTCGCCCAG GCTGTGCATC AGGCCAGTGA GCGACGCGGC
AAGCCGTTCG TTGCCATCAA CTGTGCGTCG ATCCCAGAAA GCCTGATCGA GAGTGAGCTG
TTCGGGTACC GTGGCGGCAG TTTTACCGGC GCGCGCAAGG AAGGCATGCG CGGCAAGCTG
CTGCAGGCTG ACGGCGGCAC CTTGCTGCTG GACGAGATCG GCGACATGCC GCTGGCCCTG
CAAACCCGCC TGCTGCGGGT ACTGGAGGAG CGCCAGGTGG TGCCGATCGG GGGCGAGCCG
CAGGCGGTGG ACGTGCGCAT TGTCAGCGCC ACCCACCGTG ACTTGCTGGA GCGGGTAGAG
CAGGGCAGTT TCCGCGAAGA CCTTTATTAC CGCCTCAATG GCCTGGAAGT GGCGTTGCCA
GCGGTGCGTG AGCGCAGTGA CAAGGCGCAG TTGCTGGACT TCCTGCTGCG CCAGGAGGCG
CAGGGGCAGT TGATCGACAT CGAGCCCAGG GCGCGGCAGG CACTGCTCGA ATTCACCTGG
CCGGGGAACG TGCGGCAAAT GCGCAATGTG CTGCGTACCT TGGTGGCGCT TTGCGAAGAT
TCCCGAATCG CATTGGCGGA TCTCCCAACC ATCGTCCGCA ACAACGCCAA TCCTGTGGGA
GCGGGCTTGC CCGCGAAGGC TGCCTCACAG CCGTATGAGG GCGAGGGTTT TGCCCTCGTT
CGCGGGCAAG CCCGCTCCCA CACAACCTGC GTTGATTCCG CAGTTGACGG TGAATCCGTG
GGTAACCAGG TTTTGCAGGA TGCGGAACGG CAAGTTTTGC TGGCCATGCT GGAGGCAAAA
CACTGGCACT TGACCCGCGT CGCCGAGCAC TTGGGCATCA GCCGCAATAC CTTGTATCGA
AAACTGCGCA AACACGGCAT CACCAGGGCC GACTGA
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| Protein sequence | MQSNPFSRHA QQVHSVAHGR AGEGGSDPSI ARSWLRCLED YHLDPTVIEA PVVLEHGRLL
ESRERLRQVL QIADHEMNSL HQQLSGAGHA VLLTDARGVI LNCVSAPTER RSFERAGLWL
GADWSEAREG TNGIGTCLVE RQALTIHQNE HFRGRHTGLT CSASPVFDPH GELLAVLDVS
SARPDVSRQS QFHTMALVNL SAKMIESCYF LRHFEQQWLL RFHLQAESVG LFSEGLLAFD
GDGRICAANQ SALNLLGTVR GGVLGKPLER FFACSHDELF SRATPGGSTA WPLRTLDGRQ
VFASLRGQAR APVWSVPAAQ PRPACEVEPL VCLLDPALQN DFRRSVRVFE RDVPLLLRGE
TGCGKEAFAQ AVHQASERRG KPFVAINCAS IPESLIESEL FGYRGGSFTG ARKEGMRGKL
LQADGGTLLL DEIGDMPLAL QTRLLRVLEE RQVVPIGGEP QAVDVRIVSA THRDLLERVE
QGSFREDLYY RLNGLEVALP AVRERSDKAQ LLDFLLRQEA QGQLIDIEPR ARQALLEFTW
PGNVRQMRNV LRTLVALCED SRIALADLPT IVRNNANPVG AGLPAKAASQ PYEGEGFALV
RGQARSHTTC VDSAVDGESV GNQVLQDAER QVLLAMLEAK HWHLTRVAEH LGISRNTLYR
KLRKHGITRA D
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