Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0573 |
Symbol | |
ID | 5868319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 647436 |
End bp | 648323 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641545661 |
Product | polyprenyl synthetase |
Protein accession | YP_001666820 |
Protein GI | 167031589 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGGTA CCTACCAGGC CAGTTGCCAG GCGCGGGTCG ATACCGCCCT CGAACCGCTG TTCATCGCCC CGACCAAAGA GCTGGAGCGC CTTTACGCCG CCATGCGCTA CAGCGTGATG AACGGCGGCA AGCGCGTGCG CCCGTTGCTG GCCTACGCGG CCTGCGAAGC CCTGGGCGCA CCCGCCGAAC AGGCCAACGG CGCCGCCTGC GCGGTCGAGC TGATCCACGC TTACTCGCTG GTGCATGACG ACCTGCCGGC CATGGACGAC GACGACCTGC GTCGCGGCCA GCCAACCACT CACAAAGCGT TCGATGAAGC CTGCGCCATC CTGGCTGGCG ACGGCCTGCA GAGCCTGGCG TTCAGCGCCC TGCTCGACCC ACACCTGAGC CCGCAGGCAG ACAACATCCG CCTGGCCATG GTCCAGGCAT TGGCCAAGGC TGCCGGCCCG GCCGGCATGG TCGGCGGCCA GGCCATCGAC CTCGGCTCAG TGGGCCTGAA GCTGGACCAG CAGGCGCTGG AATTCATGCA CCGACACAAG ACCGGCGCGC TGATCGAAGC CAGCGTCCGC CTCGGCGCCC TGGCCAGTGC CCGCGCCGAA CAAGCGCAGC TCGATGCCCT GCAAACTTAT GCACAGGCCA TCGGCCTGGC ATTCCAGGTG CAGGACGATA TCCTCGATGT GGAAAGCGAT ACCGCCACCC TGGGTAAACG CCAGGGCGCC GACATAGCCC GTGACAAACC GACCTATCCG GCCCTGCTGG GCCTGGAAGC GGCCAAGGCC TATGCAATCG AACTGCGCGA CCAGGCGCTG ATCGCACTGC AAGGGTTCGG TGAAACGGCC GAGCCGCTGC GGGCGCTGGC GCGCTACATC GTCGAACGCC GTAACTGA
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Protein sequence | MIGTYQASCQ ARVDTALEPL FIAPTKELER LYAAMRYSVM NGGKRVRPLL AYAACEALGA PAEQANGAAC AVELIHAYSL VHDDLPAMDD DDLRRGQPTT HKAFDEACAI LAGDGLQSLA FSALLDPHLS PQADNIRLAM VQALAKAAGP AGMVGGQAID LGSVGLKLDQ QALEFMHRHK TGALIEASVR LGALASARAE QAQLDALQTY AQAIGLAFQV QDDILDVESD TATLGKRQGA DIARDKPTYP ALLGLEAAKA YAIELRDQAL IALQGFGETA EPLRALARYI VERRN
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