| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0502 |
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| Symbol | rpmD |
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| ID | 5868248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 576991 |
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| End bp | 577167 |
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| Gene Length | 177 bp |
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| Protein Length | 58 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641545590 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_001666749 |
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| Protein GI | 167031518 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0000122641 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACCG TAAAAGTAAC GCTGATCAAG AGCGTCTCGG GCCGTCTGCC TAACCACAAG
CTGTGCGTTA AAGGCCTGGG TCTGCGTCGT ATCGGTCACA CTGTAGAAGT CCAGGATACT
CCCGAGAACC GCGGGATGAT CAACAAGGCT TACTACATGC TGAAGGTCGA GGGCTAA
|
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| Protein sequence | MATVKVTLIK SVSGRLPNHK LCVKGLGLRR IGHTVEVQDT PENRGMINKA YYMLKVEG
|
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| |