| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0470 |
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| Symbol | |
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| ID | 5868215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 550458 |
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| End bp | 551651 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641545557 |
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| Product | elongation factor Tu |
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| Protein accession | YP_001666717 |
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| Protein GI | 167031486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00495731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGG AAAAGTTTGA TCGTTCCCTT CCCCACGTTA ACGTCGGCAC TATCGGCCAC
GTTGACCACG GTAAGACCAC TCTGACCGCA GCTCTGACTC GCGTTTGCTC CGAAGTTTTC
GGTTCGGCAA TCGTTGAGTT CGACAAGATC GACTCGGCTC CGGAAGAAAA AGCGCGCGGT
ATCACCATCA ACACCGCTCA CGTTGAGTAC AACTCGACCA TTCGTCACTA CGCTCACGTT
GACTGCCCAG GTCACGCTGA CTACGTGAAG AACATGATCA CCGGTGCTGC CCAGATGGAC
GGCGCGATCC TGGTTTGCTC GGCCGCCGAT GGTCCGATGC CACAAACCCG TGAGCACATC
CTGCTGTCCC GTCAGGTTGG CGTTCCGTAC ATCGTGGTCT TCCTGAACAA GGCTGACCTG
GTAGACGACG CTGAGCTGCT GGAACTGGTC GAGATGGAAG TTCGCGACCT GCTGTCCACC
TACGACTTCC CAGGTGACGA CACTCCGATC ATCATCGGTT CCGCTCGTAT GGCCCTGGAA
GGCAAAGACG ACAACGAAAT GGGCACTACC GCTGTTAAGA AGCTGGTAGA GACTCTGGAC
AGCTACATTC CTGAGCCAGT TCGTGCCATC GACCAGCCGT TCCTGATGCC GATCGAAGAC
GTATTCTCGA TCTCGGGTCG TGGTACCGTT GTTACCGGTC GTATCGAGCG TGGTATCGTC
CGCGTTCAGG ATCCGCTGGA AATCGTTGGT CTGCGTGACA CCACCACCAC CACCTGCACC
GGCGTTGAGA TGTTCCGCAA GCTGCTGGAC GAAGGTCGTG CTGGCGAGAA CTGCGGCGTT
CTGCTGCGTG GTACCAAGCG TGACGACGTT GAGCGTGGCC AGGTTCTGGT CAAGCCAGGT
TCGGTCAAGC CGCACACCAA GTTCACCGCA GAAGTCTACG TTCTGTCGAA GGAAGAAGGC
GGTCGTCACA CTCCGTTCTT CAAAGGCTAC CGTCCTCAGT TCTACTTCCG TACCACTGAC
GTGACCGGTA ACTGCGAACT GCCGGAAGGC GTTGAAATGG TAATGCCAGG TGACAACATT
CAGATGACTG TTACCCTGAT CAAGACCATC GCAATGGAAG ACGGTCTGCG CTTCGCAATC
CGTGAAGGCG GTCGTACCGT CGGCGCCGGT GTCGTAGCAA AAATTATTGA ATAA
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| Protein sequence | MAKEKFDRSL PHVNVGTIGH VDHGKTTLTA ALTRVCSEVF GSAIVEFDKI DSAPEEKARG
ITINTAHVEY NSTIRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLSRQVGVPY IVVFLNKADL VDDAELLELV EMEVRDLLST YDFPGDDTPI IIGSARMALE
GKDDNEMGTT AVKKLVETLD SYIPEPVRAI DQPFLMPIED VFSISGRGTV VTGRIERGIV
RVQDPLEIVG LRDTTTTTCT GVEMFRKLLD EGRAGENCGV LLRGTKRDDV ERGQVLVKPG
SVKPHTKFTA EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGNCELPEG VEMVMPGDNI
QMTVTLIKTI AMEDGLRFAI REGGRTVGAG VVAKIIE
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