Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0459 |
Symbol | |
ID | 5868198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 534139 |
End bp | 534921 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641545540 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001666706 |
Protein GI | 167031475 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.240703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTT ACGCCATGAT CACTGGTGCT TCCAGCGGCC TGGGCCTGGC CCTGGCGGAA GCGCTGGCAC GGCGTGGGCG CAACCTGATC CTGGTAGCAC GTCAGCGAGA AACACTGGAG CCTGTAGCCA TCGAGCTTAC CCAGCGCTTC GGGGTCGAGG TGCTGTTCCG CGCCTGCGAC CTCAGCCAGC CGCTGCGCCT GTCTGGCTTC GTACTGGAAC TGGAAGAAGG CGAACGGCGT ATCGACCTGC TGGTCAACTG CGCGGGGTTA CGCACCTACG GGCCGTTCCT GGCCCATGAG TGGGCCGACG AGCAAGACCT GCTGGAGGTC AACGTGCTGG CCCTGAGCCG CCTGTGCCAC GCCATCGGCA ACCTGATGGC CGTGCAGGGC GGCGGGCAGA TCCTCAACGT CGCCGGCCTG GCCGGGATGG CACCCGGCCC GTGGATGGCA GCCTATACCG CCAGCAAGGC GTATGTACTG AGTTTTTCCC AGGCGCTTCG CGAAGAGCTC AAGCGCACCG GCATCAAGGT CTCGGTACTG TGCCCCGGCC CAGTGCGTTC CGCGCGCCGG CGCATTGCGC GGCTCGACGG CAAACCGCGC TGCCTCAGCC CCGAGGAAGT AGCGCTGTAC ACCGTCCGCG CACTGGACAA GAACCGCGCG CTGATCATGC CCGGCCGGCG CAACCGCTGG CTGGCATTCG CCCCGCGCCT GCTGCCACGC TGGTTGGTGC GCAAGCTGGC CGGGGCCATC CACCGCCGCT ATTGCCCGGT CGGCATGGAA TAG
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Protein sequence | MTRYAMITGA SSGLGLALAE ALARRGRNLI LVARQRETLE PVAIELTQRF GVEVLFRACD LSQPLRLSGF VLELEEGERR IDLLVNCAGL RTYGPFLAHE WADEQDLLEV NVLALSRLCH AIGNLMAVQG GGQILNVAGL AGMAPGPWMA AYTASKAYVL SFSQALREEL KRTGIKVSVL CPGPVRSARR RIARLDGKPR CLSPEEVALY TVRALDKNRA LIMPGRRNRW LAFAPRLLPR WLVRKLAGAI HRRYCPVGME
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