Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0435 |
Symbol | |
ID | 5868174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 507526 |
End bp | 510324 |
Gene Length | 2799 bp |
Protein Length | 932 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641545516 |
Product | organic solvent tolerance protein |
Protein accession | YP_001666682 |
Protein GI | 167031451 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00337227 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGA AATCCCCCGC GTTTCGTAGA AAGTTTCCGT TGCTGGTAAC CGGCGGTCTG CTGGCCCTGC AACCTCTGGC CACCTCATAT GCAGTGGCAG CCGAACAGTT CGACTGCCAA GTGTCCGCCG CCGGTGGCTG GGACTGCAAG CCCAAGGCCC CAGTCAACAA CCTGCCGCCA CGCCCGGTGC ACGAAGGTGC GGCCGTCAGC TCCGGCACTG AAGCCGCCAG CGAAGGCGAA ACCGCGGACC GGCCGATGCT GGTTACCGAG GCCAAGGGCC GTGCCCTGAA GTCGCGCAGC GAAGACTACA GCCACCTGGA CTGGGTGCCG CGTGAAAAGC TCACCGCCGC GCAGCTGGCC GAAACCGGCC CGTACTGCGG TGGCGCCTAT GTCGAGCCAA CCCGCCCGGG CATGGCCGAC ACCACGCCGA AGGATGAGTC GCCGACCTAC ATCAACGCCA AGGTATCCAA GTACCAGCAG GAGCAGCAGA TCGCTACCCT CGCCGGTGAC GTGGTGATGC GCCAGGGCAG CATGCAGGCC GAGGCCGACG AGGCCAACCT CTACCAGACC GAAAACCGTG GCGAGCTCAA GGGCAACGTC AAGATCCGTG ACAACGGGTC GTTGGTGGTC GGTGACGAGG CGCAAATCCA GCTCGACACC GGCGAAGCCC AGGTCGACAA CGCCGAATAC GTGATGCACA AGTCGCACAT CCGCGGCAGT GCCCTGTACG CCAAGCGTGG CGAGAACGCC ATCATCCGCC TCAAGGACGG TACGTACACC ACCTGCGAAC CGGGCAGCAA CGCCTGGCAG CTGAAGGGCA ACAACATCAC CCTGAACCCG GCCACCGGCT TCGGTACCGC GACCAACGTT ACGCTGCGGG TCAAGGATTT CCCGGTGTTC TACACACCGT ACATCTACTT CCCGATCGAC GACCGTCGCC AGTCCGGCTT CCTGCCGCCA TCGTTCAGCA CCAGCAGCGA TACCGGCTTC ATGCTGGTCA CGCCGTACTA CTTCAACCTG GCGCCGAACT ACGACGCCAC GTTGTACCCG CGTTACATGG CCAAGCGCGG CCTGCTGATG GAAGGCGAGT TCCGCTACCT GACGCCTTCG AGCGAAGGTC AGTTTGGCGG TGCGTACCTG AACGACAAGG ATGACGACCG TAAAGAGCAG ACTGACTACA AAGATCAGCG CTGGATGGTC AACTGGCAGC ACAAAGGTGG GCTGGACGAG CGCCTGATGA CTGAGGTGGA CTACACCGAC ATCAGCGACC CGTTCTACTT CCAGGACCTG GAGTCCGACC AGATCGGCGT GGAAAGCCGT GACCTGCTGA ACCAGCAGGG TGCGCTGACC TACCGTGGCG ACAACTACAC CGCGCGATTG AACGTGCATG CCTACGAGAT GGCGACCATC TCGCAGATCA CACCGTATGA TCGCCTGCCG CAGATCACGC TCAATGGCGT ATTGCCCTAC AATCCGGGCG GCCTGGTTAT GGGTTACGAG AGCGAGGCGG TACGCTTCGA CCGCGACCTG AAGGACGACT TCGTACGGGA TAAAGATGGC AACCCTGACT TCTCGGCAGG TGCAGCCGGC CGTCGTCTGG ACCAGAACGT CAGCGGTATT GCCCGCGCCA ACGGCAACCG CTTCAACGTC GCGCCGTCGA TCAGCCTGCC GATGGAAGCC AGCTATGGCT ACCTGACCCC TAAGCTGAAG TATGCGTACA CCCACTACGA CCTAGACCTG GACAGCCAGG GCAAGGCGCA GGCAATCGCG CAGTCCGCCA ACCCGGCGTA TGGCAGCTAT AACAGCTCGC TGAACCGCGA CGTACCGATC TTCAGCGTGG ATAGCGGCCT GTACTTCGAC CGCAACACGT CGTTGTTCGG CACGAACTAC AAGCAGACCC TCGAGCCGCG CCTGTTCTAT CTCAATGTCC CTTACAAGGA CCAGAGAGAT ATCCCGATCT TCGACTCAAG CGAAACGCTG TTCAGTTACG ACTCACTGTT CCGCGACAAT CGATTCAGCG GCACGGACCG CATCGGCGAT GAGAACAAAT TGTCGCTTGG CGTAACTACT CGCTGGATCG AGGATAACGG GTTCGAGCGG CAAAACTTCA GCATCGGCCA AGCTTACTAC TTCAAGGACC GAAAGGTTCA GTTGCCCGGC ATCTACTATA AAGACCGACA GTCCGCTCAG TCCGATACCT CGCCGTACGC GCTTGTATAT AACTACTACT TTAACCGTGA CTGGCGCTTC AACTCGGACT TCAACTGGGA TCCGGACAGC CGCAGCACCC GATCAGGCAG CGCGATGTTC CATTACCAGC CTGAAGACAA CCCGAATAAA GTGGTCAACC TCGGCTACCG CTATCGTAAT GACACCATTA TTTACGACTC GACCACAGGT ACGTGGAAAG AGGGTGGCAG CTATGGCAAC CCAGGCGACC CGAACTACAT CAAGGACTAC TACAAGATCC AGCAGCATGA CTTCTCGGTC ATCTGGCCGA TCGTTCCGCA GTGGAGCGTC ATCGCTCGCT GGCAGCATGA CTACAACCGC AACCGCACCC TGGAAGCCAT GGGCGGTTTC GAGTACGACA ACTGCTGCTG GAAGCTGCGC CTGATCAACC GCTACTGGAT CGATTACGAC GACTTCAGCC AAGCCCTCCC GGCGAACGAA AAAGGCGACC ACGGTGTCTT CCTTCAGATC GTCCTGAAAG GCCTCGGTGG CGTAGTTGGC AACAAGGTCG AGTCTTTCCT CGACCAAGGC ATTCAAGGTT ACCGTGAACG TGAAGACCAA GCTTATTGA
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Protein sequence | MALKSPAFRR KFPLLVTGGL LALQPLATSY AVAAEQFDCQ VSAAGGWDCK PKAPVNNLPP RPVHEGAAVS SGTEAASEGE TADRPMLVTE AKGRALKSRS EDYSHLDWVP REKLTAAQLA ETGPYCGGAY VEPTRPGMAD TTPKDESPTY INAKVSKYQQ EQQIATLAGD VVMRQGSMQA EADEANLYQT ENRGELKGNV KIRDNGSLVV GDEAQIQLDT GEAQVDNAEY VMHKSHIRGS ALYAKRGENA IIRLKDGTYT TCEPGSNAWQ LKGNNITLNP ATGFGTATNV TLRVKDFPVF YTPYIYFPID DRRQSGFLPP SFSTSSDTGF MLVTPYYFNL APNYDATLYP RYMAKRGLLM EGEFRYLTPS SEGQFGGAYL NDKDDDRKEQ TDYKDQRWMV NWQHKGGLDE RLMTEVDYTD ISDPFYFQDL ESDQIGVESR DLLNQQGALT YRGDNYTARL NVHAYEMATI SQITPYDRLP QITLNGVLPY NPGGLVMGYE SEAVRFDRDL KDDFVRDKDG NPDFSAGAAG RRLDQNVSGI ARANGNRFNV APSISLPMEA SYGYLTPKLK YAYTHYDLDL DSQGKAQAIA QSANPAYGSY NSSLNRDVPI FSVDSGLYFD RNTSLFGTNY KQTLEPRLFY LNVPYKDQRD IPIFDSSETL FSYDSLFRDN RFSGTDRIGD ENKLSLGVTT RWIEDNGFER QNFSIGQAYY FKDRKVQLPG IYYKDRQSAQ SDTSPYALVY NYYFNRDWRF NSDFNWDPDS RSTRSGSAMF HYQPEDNPNK VVNLGYRYRN DTIIYDSTTG TWKEGGSYGN PGDPNYIKDY YKIQQHDFSV IWPIVPQWSV IARWQHDYNR NRTLEAMGGF EYDNCCWKLR LINRYWIDYD DFSQALPANE KGDHGVFLQI VLKGLGGVVG NKVESFLDQG IQGYREREDQ AY
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