Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0432 |
Symbol | ksgA |
ID | 5868171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 504443 |
End bp | 505243 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545513 |
Product | dimethyladenosine transferase |
Protein accession | YP_001666679 |
Protein GI | 167031448 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.509897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGC AATACCAACA CCGGGCGCGC AAGCGCTTCG GCCAGAACTT CCTGCACGAC GCCGGCGTCA TCGACCGCAT CCTGCGTGCC ATCAACGCCA AGGCCGGCGA ACACCTGCTG GAAATCGGCC CGGGCCAGGG CGCCCTGACC GAAGGCCTGC TGGGCAGCGG CGCACAACTG GACGTGGTGG AGCTGGACAA GGACCTGGTA CCGATCCTGC AGCACAAGTT CGCTGATCGC GGCAACTTCC GCCTGCACCA GGGCGACGCC CTGAAGTTCG ACTTCAACCA GCTGGGCGTG CCGCCACGCA GCCTCAAGGT AGTGGGCAAC CTGCCCTACA ACATCTCCAC CCCGCTGATC TTCCACCTGC TCAGCCATGC CGGGCTTATC CGCGACATGC ACTTCATGCT GCAGAAGGAA GTGGTCGAGC GCATGGCAGC CGGCCCTGGC GGGGGTGACT GGGGGCGCCT GTCGATCATG GTGCAGTACC ACTGCCGCGT GGAGCACCTG TTCAATGTCG GCCCTGGCGC CTTCAACCCA CCGCCAAAAG TCGATTCAGC CATCGTCCGC CTGGTGCCGC ACGAAGTGCT GCCCCACCCG GCCAAGGATG CGAAGCTGCT GGAGCAGGTG GTACGCGAGG CGTTCAACCA GCGTCGCAAA ACCCTGCGCA ACACCATGAA GGGCCTGCTC GACAGCGCGG CCATCGAGGC CGCTGGTGTG GATGGCAGCC TGCGTCCTGA ACAGCTGGAC CTGGCAGCCT TCGTGCGCCT GGCCGACCAA CTGGCTGATC AGCAAGCCTG A
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Protein sequence | MNEQYQHRAR KRFGQNFLHD AGVIDRILRA INAKAGEHLL EIGPGQGALT EGLLGSGAQL DVVELDKDLV PILQHKFADR GNFRLHQGDA LKFDFNQLGV PPRSLKVVGN LPYNISTPLI FHLLSHAGLI RDMHFMLQKE VVERMAAGPG GGDWGRLSIM VQYHCRVEHL FNVGPGAFNP PPKVDSAIVR LVPHEVLPHP AKDAKLLEQV VREAFNQRRK TLRNTMKGLL DSAAIEAAGV DGSLRPEQLD LAAFVRLADQ LADQQA
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