| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0419 |
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| Symbol | dnaG |
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| ID | 5868158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 490987 |
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| End bp | 492969 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545500 |
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| Product | DNA primase |
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| Protein accession | YP_001666666 |
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| Protein GI | 167031435 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.26647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGC TGATTCCCCA GAGCTTCATT GACGACCTTA TCAACCGCCT CGACATTGTC
GACGTGGTGA GTTCGCGCGT CCAACTGAAA AAAACCGGCA AGAACTACTC CGCCTGCTGC
CCGTTCCACA AGGAAAAGAC CCCTTCCTTC ACGGTCAGCC CCGACAAGCA GTTCTACTAC
TGCTTCGGCT GCGGCGCCGG TGGCAACGCC CTGGGTTTCG TCATGGACCA CGACAACCTG
GACTTCCCCC AGGCCGTCGA GGAGCTGGCC CGCGCCGCTG GCATGGAAGT GCCCCGCGAA
CAAGGCCGCC GCGACCAGAA GCCGCGCCAG CCCACCGATT CGCCGCTGTA CCCGCTACTG
GACGCTGCCT CGGAGTTCTA CCGCCAGGCC CTGCGCAACC ACCCGACCCG CAAGGCGGCG
GTGGATTACC TCAAGGGCCG CGGCCTGTCC GGCGAGATTG CCCGCGATTT CGGCCTGGGT
TTTGCCCCGC CCGGCTGGGA CAACCTGCTC AAGCACCTGG GTGCCGACAC CCTGCAGCAG
AAAGTGATGA TCGATGCCGG CCTGCTGATC GAGAACGCCG AAAGCGGCAA GCGCTACGAC
CGTTTCCGCG ACCGGGTGAT GTTCCCGATC CGCGACAGCC GCGGGCGCAT CATCGCCTTC
GGCGGCCGGG TACTCGGCGA CGACAAGCCC AAGTACTTGA ACTCCCCTGA AACCCCGGTG
TTCCACAAGG GCCAGGAGCT GTACGGGCTG TACGAGGCAC GCAAGCACAA CCGCAACCTC
GACGAGATCA TCGTCGTCGA GGGCTACATG GACGTCATCG CCCTGGCCCA GCAAGGCCTG
CGCAATGCCG TGGCCACCCT CGGCACCGCC ACCAGCGAAG AGCACCTCAA GCGCCTGTTC
CGCGTGGTGC CCAGCGTGTT GTTCTGCTTC GACGGCGACC AGGCCGGGCG CAAGGCCGCC
TGGCGCGCAC TGGAATCGGC CTTGCCGAAC CTGCAGGATG GCCGCCGCGC ACGTTTTCTG
TTCCTGCCCG AAGGCGAGGA CCCGGACAGC CTGGTACGCG CCGAAGGCAC CGACGCCTTC
ATGGCCCGTA TCAACCAGCA CGCCCAGCCG CTGGCCGATT ACTTCTTCGA GCAACTGAGC
GTCGAAGCCG ACCCACGCTC GCTGGAAGGC AAGGCACACA TGGCGACCCT GGCGGCACCG
TTGATCGAAA AGATCCCTGG CGCCAACCTG CGCCAGCTCA TGCGCAACCG CCTGAAGGAA
ATCACCGGCC TCGACCCGCA GCAGGTCGAG CAACTGGCGC AACAAGCACC CACGGTTAGC
AGCGTGCCGG ACTACGACCC TGGCTACGAC TACGACGCCA TGGCCAGCTA CACCCCCGAT
TACGGCGACA TGCCGCAACA CGACTTCGCC CCCGTTCATC AGGAGCAGGC CTGGAAGCCC
AACAAGAGCG GCGGTAAGAA GCCATGGAGC GACAAGCCCT GGGACAAGAA CCGCAAGGGT
GGCAAGCCGT GGCAACAACG TGACGAAGCG CCACCCCGCG TGCCGGCGCC GGTCGAGCCA
CCAACCCTGG CCGCCCTGCG CACCCTTCTG CACCACCCGC TGCTGGCCGG CAGGGTAGAA
GATGCCAGCC ACTTCGCCGA CGAAGAACAC CTGTACAGCC AGCTGCTGGT GGCATTGATC
GAAGCCGCAC AGAAAAATCC TGGGCTAAGC TCAATGCAGT TGATCGCACG CTGGCATGGC
ACCGAGCAGG GTCGCCTGTT GCGGGCCCTG GCGGAAAAGG AATGGCTGAT CGTGGCCGAC
AACCTTGAAC AACAGTTTTT CGACACTATA ACTAGCTTGT CCGCCCGCCA ACGCGAGCGC
AGCCTGGAAC AACTGCTCAG GAAATCACGT CAAAGCGAAT TGACCAGCGA GGAAAAAACC
CAGCTCCTCG CCCTGCTGAG CCGGAATGTT CCCGCACAAA CGCCGACCTC ATCTGGCGCG
TGA
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| Protein sequence | MAGLIPQSFI DDLINRLDIV DVVSSRVQLK KTGKNYSACC PFHKEKTPSF TVSPDKQFYY
CFGCGAGGNA LGFVMDHDNL DFPQAVEELA RAAGMEVPRE QGRRDQKPRQ PTDSPLYPLL
DAASEFYRQA LRNHPTRKAA VDYLKGRGLS GEIARDFGLG FAPPGWDNLL KHLGADTLQQ
KVMIDAGLLI ENAESGKRYD RFRDRVMFPI RDSRGRIIAF GGRVLGDDKP KYLNSPETPV
FHKGQELYGL YEARKHNRNL DEIIVVEGYM DVIALAQQGL RNAVATLGTA TSEEHLKRLF
RVVPSVLFCF DGDQAGRKAA WRALESALPN LQDGRRARFL FLPEGEDPDS LVRAEGTDAF
MARINQHAQP LADYFFEQLS VEADPRSLEG KAHMATLAAP LIEKIPGANL RQLMRNRLKE
ITGLDPQQVE QLAQQAPTVS SVPDYDPGYD YDAMASYTPD YGDMPQHDFA PVHQEQAWKP
NKSGGKKPWS DKPWDKNRKG GKPWQQRDEA PPRVPAPVEP PTLAALRTLL HHPLLAGRVE
DASHFADEEH LYSQLLVALI EAAQKNPGLS SMQLIARWHG TEQGRLLRAL AEKEWLIVAD
NLEQQFFDTI TSLSARQRER SLEQLLRKSR QSELTSEEKT QLLALLSRNV PAQTPTSSGA
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