| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0393 |
|---|
| Symbol | |
|---|
| ID | 5868131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 458709 |
|---|
| End bp | 459881 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641545473 |
|---|
| Product | 8-amino-7-oxononanoate synthase |
|---|
| Protein accession | YP_001666640 |
|---|
| Protein GI | 167031409 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.221946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.405547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCG ACCTGGCAGC GCGCCTGGCC GAACGGCGCG CCGCAGACCT GTATCGGCAG
CGGCCACTAT TGGAAAGCCC ACAGGGGCCG GAAGTAGTGG TCGATGGCCA ACGCCTGCTG
GCCTTCTGTA GCAATGACTA CCTGGGTTTG GCCAACCACC CCGAGGTTAT CTCTGCCTGG
CAGGCCGGCG CCGAGCGCTG GGGTGTGGGC GGCGGTGCCT CGCACCTGGT GGTCGGCCAC
AGCACGCCGC ACCACCAGGT TGAAGAGGCG CTGGCCGAAC TGACCGGGCG TCCGCGCGCG
CTGTTGTTCT CTACCGGCTA CATGGCCAAC CTGGGCGCCA TCACCGCGCT GGTGGGGCAG
GGTGACACGG TGCTGCAAGA CCGACTGAAT CATGCCTCGC TGTTGGATGG CGGGTTGCTC
AGCGGTGCGC GCTTCAACCG CTACTTGCAC AACGACTCAG CGAGCCTGGC CAGCCGCCTG
GACAAGGCCG TCGGCAATAC CCTGGTGGTG ACTGATGGTG TGTTCAGCAT GGACGGCGAC
CTGGCCGACC TGCCGGCGCT GGCCGATGTC GCCCGTGGCC GTGGCGCCTG GTTGATGGTC
GACGATGCCC ATGGCCTGGG TACCTTGGGC GCACAAGGCG GCGGTATCGT CGAGCACTTC
GGCCTGGGCG TGGCTGATGT ACCGGTCTTG ATCGGCACGC TGGGCAAGGC CTGCGGTACC
GCAGGTGCCT TTGTTGCCGG CAGCGAAGAT CTGATCGAGG CACTGGTGCA GTTCGCCCGG
CCCTACATCT ACACCACCAG CCAGCCACCG GCGCTGGCCT GCGCTACGCT CAAAAGCCTG
GAGCTGCTGC GCCGCGAAAC CTGGCGCCGT GAGCACCTGG CCGCGTTGAT TCGCCAGTTC
CGCGAAGGCG CGCAGCAGAT CGGGCTGCAA CTGATGGACA GCCCGACGCC GATCCAGCCC
ATCGTGATCG GCGACAGTGC GCAGGCCTTG CGCCTGTCAC GCATGCTGCG CGAGCGCGGC
TTGCTGGTGA CGGCTATCCG TCCGCCTACC GTGCCGGCGG GTAGCGCCCG TCTGCGGGTA
ACCTTGAGCG CCGCGCACAG CGAGGCGCAG GTGCAGCTAT TGTTGAATGC ATTGGCCGAG
TGTTATCCAC AACTGGAGAA CGCCGATGCG TAA
|
|---|
| Protein sequence | MAFDLAARLA ERRAADLYRQ RPLLESPQGP EVVVDGQRLL AFCSNDYLGL ANHPEVISAW
QAGAERWGVG GGASHLVVGH STPHHQVEEA LAELTGRPRA LLFSTGYMAN LGAITALVGQ
GDTVLQDRLN HASLLDGGLL SGARFNRYLH NDSASLASRL DKAVGNTLVV TDGVFSMDGD
LADLPALADV ARGRGAWLMV DDAHGLGTLG AQGGGIVEHF GLGVADVPVL IGTLGKACGT
AGAFVAGSED LIEALVQFAR PYIYTTSQPP ALACATLKSL ELLRRETWRR EHLAALIRQF
REGAQQIGLQ LMDSPTPIQP IVIGDSAQAL RLSRMLRERG LLVTAIRPPT VPAGSARLRV
TLSAAHSEAQ VQLLLNALAE CYPQLENADA
|
|---|
| |