Gene PputGB1_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0392 
Symbol 
ID5868130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp457649 
End bp458707 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content62% 
IMG OID641545472 
Productbiotin synthase 
Protein accessionYP_001666639 
Protein GI167031408 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.92095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.311291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA GCACAACTGC AACAACACGT CACGACTGGT CCCTGGCCGA GGTCAAGGCG 
CTGTTCCAGC AACCGTTCAA TGACTTGCTG TTCCAGGCGC AGACCGTACA CCGCGCGCAT
TTCGACCCAA ACCGCGTGCA GGTTTCGACT TTGCTGTCGA TCAAGACCGG TGCCTGCCCG
GAAGATTGCA AATATTGTCC CCAGTCCGGC CACTACAACA CCGGGCTGGA AAAACAGAAA
CTGATGGAAG TGCAGAAGGT GCTGGAAGAG GCCGCCCGGG CCAAAGCCAT CGGTTCTACC
CGCTTCTGCA TGGGCGCGGC TTGGAAGCAC CCGTCGGCCA AAGACATGCC CTACGTGTTG
GAGATGGTCA AAGGTGTGAA GGCCATGGGC CTGGAAACCT GCATGACCCT CGGCAAGCTC
GACCAGGATC AGACCCTGGC CCTGGCCCAG GCTGGCCTGG ACTACTACAA CCACAACCTC
GACACCTCGC CGGAGTTCTA CGGCAGCATC ATCACCACCC GCACCTATGG CGAGCGCCTG
CAGACCCTGG CCTACGTGCG CGATGCTGGA ATGAAGATCT GCTCCGGTGG CATCCTGGGC
ATGGGCGAGT CGCTGGACGA CCGCGCCGGC CTGCTGATCC AGCTGGCCAA CCTGCCCGAG
CACCCGGAAT CGGTACCGAT CAACATGCTG GTCAAGGTGG CCGGCACACC GCTGGCCGAG
GAAGAAGACG TCGACCCGTT CGACTTCATT CGCATGCTGG CCGTGGCCCG TATCCTCATG
CCCAAGTCGC ACGTGCGTCT GTCCGCAGGC CGCGAGCAGA TGAACGAGCA GATGCAGGCC
TTGGCCTTCA TGGCTGGCGC CAACTCGATT TTCTACGGCG AAAAACTGCT GACTACCGCC
AACCCGCAGG CCGACAAGGA CATGCAACTG TTCGCACGCC TGGGCATCAA GCCCGAAGCG
CGGGAAGAGC ACGCCGATGA AGTGCATCAG GCGGCGATCG AGCAGGCGCT GGTCGAACAG
CGCAGCAGCG AGATGTTCTA CAACGCTGCA TCGGCCTGA
 
Protein sequence
MSASTTATTR HDWSLAEVKA LFQQPFNDLL FQAQTVHRAH FDPNRVQVST LLSIKTGACP 
EDCKYCPQSG HYNTGLEKQK LMEVQKVLEE AARAKAIGST RFCMGAAWKH PSAKDMPYVL
EMVKGVKAMG LETCMTLGKL DQDQTLALAQ AGLDYYNHNL DTSPEFYGSI ITTRTYGERL
QTLAYVRDAG MKICSGGILG MGESLDDRAG LLIQLANLPE HPESVPINML VKVAGTPLAE
EEDVDPFDFI RMLAVARILM PKSHVRLSAG REQMNEQMQA LAFMAGANSI FYGEKLLTTA
NPQADKDMQL FARLGIKPEA REEHADEVHQ AAIEQALVEQ RSSEMFYNAA SA