Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0315 |
Symbol | hisH |
ID | 5868055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 366561 |
End bp | 367199 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545397 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_001666564 |
Protein GI | 167031333 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGACGG TAGCCGTAAT CGACTATGGC ATGGGCAACC TGCACTCGGT GGCCAAGGCG CTTGAGCACG TAGGTGCCGG TAAGGTGTTG GTCACCAGCG ATGCCGCAGT GATCCGCGAG GCCGACCGCG TGGTGTTCCC AGGTGTGGGT GCGATTCGCG ACTGCATGGC CGAAATCCGC CGCCTGGGCT TCGACAGCCT GGTACGTGAA GTCAGCCAGG ACCGCCCGTT CCTCGGTATC TGCGTCGGTA TGCAGGCGCT GCTCGAACAC AGCGAAGAAA ACACCGGTGT CGATTGCATC GGTCTGTTTC CCGGCCAGGT GCGTTTCTTC GGCAAAGACC TGCAAGAAGA CGGCGAGCAC CTGAAGGTGC CGCACATGGG CTGGAACGAA GTTGCCCAGA CCATCGACCA CCCGCTGTGG CACGACATCC CCGACCGCGC ACGTTTCTAC TTCGTGCACA GCTACTACAT CAATGCCGGC AAGCCGGGCC AGGTGGTCGG TCGCGGCCAC TATGGCGTCG ATTTCGCCGC CGCGCTGGCT GATGGCTCGC GCTTTGCCGT GCAGTTCCAC CCGGAGAAGA GCCATACCCA TGGCCTGCAG TTGCTGCAGA ACTTCGTCGC CTGGGACGGG CGCTGGTAA
|
Protein sequence | MQTVAVIDYG MGNLHSVAKA LEHVGAGKVL VTSDAAVIRE ADRVVFPGVG AIRDCMAEIR RLGFDSLVRE VSQDRPFLGI CVGMQALLEH SEENTGVDCI GLFPGQVRFF GKDLQEDGEH LKVPHMGWNE VAQTIDHPLW HDIPDRARFY FVHSYYINAG KPGQVVGRGH YGVDFAAALA DGSRFAVQFH PEKSHTHGLQ LLQNFVAWDG RW
|
| |