Gene PputGB1_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0289 
Symbol 
ID5867986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp336259 
End bp338073 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content66% 
IMG OID641545369 
Producthistidine kinase 
Protein accessionYP_001666538 
Protein GI167031307 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAA AACCCACGCC CCCACGCCGT CCCCGCTGGC GCAGCCTGGC CTTGCTGGCC 
CTGTGCCTGG CACCGTTACT GTGGCCGTTG CACCATCTGG CCGAACGCTA CTACCAGCAA
GAGCTGGCCT CGCAGAACCG CCAGACCCTC GACCTGTATG TCGCCAACCT GCTCGGCACC
CTGCACCGCT ACGAGACCCT CCCGCAAATC CTCGGCGACC TGCCGGCATT GCGTGGCGTG
TTGGCCGACC CGTTCCGCCT GGAAGCGGTG ACCAACGCCA ACCGCCTGCT CAAAGACATT
GTCCAGCAGA CCGGTGCCGA GGTGATGTAC CTGATGGACG TCAGCGGCAA CACCCTGGCC
GCCTCCAATT GGGACAAGCA CGACAGCTTC GTCGGCCGCA ATTTCGCCTT CCGTCCCTAC
TTCAACGAGG CCATGGCCGG GCATCTGGGC CGTTTCTTCG GCCAGGGCAC CACGTCGGCC
AAACGCGGCT ACTTTTTCGC CGCAGCAGTA CGGGACCGTG AGCGGACCGT GGGCGTGCTG
GTGGTCAAGG TCGACCTGGA TCACACCGAA ACCCTGTGGG GTCGTACCCC TGAGCAGTTG
TTGCTGACCG ATCACAATGG CGTGGTCATC CTCACCTCGC GGCCCGACTG GCGCTTTCGT
GCCACCCGTG TGCTGAGCGA GGCCGAGCGC CAGGCCATCA TCGCCATCCA GCCCTACCCG
ACCCAGGCCC CGCAACCGCT GGTACTCAGC CCGGACGCCT GGATCTCCCA AACCCGCGAC
ATCAAGGAAA CCGGCTGGCA AGTGAGCATC CTTGCCCCAC GCACACTGGT CGACCGCTCG
GTACAGACGG TGATGGCAAT CGGCGCCGGC ACCTTGCTGG TGGTAATGCT GCTGGCCGGG
CTGGTGATGC AGCGGCGGCG CCATTACATC GACCGCATCG ACTTCGAGGC CCGTGGCCGC
CAAGAGCTGG AAAAACGTGT AGCCGAACGT ACCGCCGACC TCGAAGGCCT GAACACCCGC
CTGAAAAGCG CCGTGCTGGA ACGCGAGAAC GCTCAGCAGG AAGCCGTGCG CGCCCAGGAC
GAACTGGTGC AGGCCGGCAA GCTGTCGGTA CTGGGCACCA TGTCGGCCAG CATCAGCCAT
GAGCTGAACC AGCCGCTGGC GGCCATTCGC AGCTACGCGG AAAACGCCGA GATCCTACTC
GACCACCAAC GCACCGAAGA CGCACGCGGC AACCTCAAGC TGATCGGCGA GCTGACCGGG
CGCATGGCCT CGATCATCGC CCACCTGCGC GCCTTCGCCC GCCGCGACCG CCACGCCCCG
GAAAGCGTGG CCCTGCAGCC GGCCCTGGAC GATGCCCTGG CGCTGCTGGC CAAACGCCGC
CGGGCAATGG CCGTAGAGCT GATCCGCGAC CTGCCTGAAG CCACTTTGTG GGTACAGGCC
GGTGAAACCC GACTGCGCCA GGTGCTGGGC AACCTGCTGG CCAATGCCCT CGATGCCCTG
ACCGAAAAGG CCAACCCGCG CCGTTTGTGG CTAAGTGCCG AGCAACGTGA TGGCTGCGTC
TACCTGTACA TCCGCGACAA CGGCCCCGGT TTCAGCCGCC AGGCCCTGGA GCACGCCAAG
GAGCCGTTCT TCACCACCAA GACCCGTACC CAGGGCTTGG GCCTTGGCCT GGCCATCTGC
GAAAGCCTGA TGCGCGCCCT GGGCGGTGAA CTGCTGCTGG CCAACCACCC GGAAGGTGGC
GCACTGCTGA CCCTGCAGCT GCGTGTGGCC GCGCCTGGCG CTACTTTGCC CAATTCGGAG
GACCCCTCGG CATGA
 
Protein sequence
MIAKPTPPRR PRWRSLALLA LCLAPLLWPL HHLAERYYQQ ELASQNRQTL DLYVANLLGT 
LHRYETLPQI LGDLPALRGV LADPFRLEAV TNANRLLKDI VQQTGAEVMY LMDVSGNTLA
ASNWDKHDSF VGRNFAFRPY FNEAMAGHLG RFFGQGTTSA KRGYFFAAAV RDRERTVGVL
VVKVDLDHTE TLWGRTPEQL LLTDHNGVVI LTSRPDWRFR ATRVLSEAER QAIIAIQPYP
TQAPQPLVLS PDAWISQTRD IKETGWQVSI LAPRTLVDRS VQTVMAIGAG TLLVVMLLAG
LVMQRRRHYI DRIDFEARGR QELEKRVAER TADLEGLNTR LKSAVLEREN AQQEAVRAQD
ELVQAGKLSV LGTMSASISH ELNQPLAAIR SYAENAEILL DHQRTEDARG NLKLIGELTG
RMASIIAHLR AFARRDRHAP ESVALQPALD DALALLAKRR RAMAVELIRD LPEATLWVQA
GETRLRQVLG NLLANALDAL TEKANPRRLW LSAEQRDGCV YLYIRDNGPG FSRQALEHAK
EPFFTTKTRT QGLGLGLAIC ESLMRALGGE LLLANHPEGG ALLTLQLRVA APGATLPNSE
DPSA