Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0289 |
Symbol | |
ID | 5867986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 336259 |
End bp | 338073 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641545369 |
Product | histidine kinase |
Protein accession | YP_001666538 |
Protein GI | 167031307 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCAA AACCCACGCC CCCACGCCGT CCCCGCTGGC GCAGCCTGGC CTTGCTGGCC CTGTGCCTGG CACCGTTACT GTGGCCGTTG CACCATCTGG CCGAACGCTA CTACCAGCAA GAGCTGGCCT CGCAGAACCG CCAGACCCTC GACCTGTATG TCGCCAACCT GCTCGGCACC CTGCACCGCT ACGAGACCCT CCCGCAAATC CTCGGCGACC TGCCGGCATT GCGTGGCGTG TTGGCCGACC CGTTCCGCCT GGAAGCGGTG ACCAACGCCA ACCGCCTGCT CAAAGACATT GTCCAGCAGA CCGGTGCCGA GGTGATGTAC CTGATGGACG TCAGCGGCAA CACCCTGGCC GCCTCCAATT GGGACAAGCA CGACAGCTTC GTCGGCCGCA ATTTCGCCTT CCGTCCCTAC TTCAACGAGG CCATGGCCGG GCATCTGGGC CGTTTCTTCG GCCAGGGCAC CACGTCGGCC AAACGCGGCT ACTTTTTCGC CGCAGCAGTA CGGGACCGTG AGCGGACCGT GGGCGTGCTG GTGGTCAAGG TCGACCTGGA TCACACCGAA ACCCTGTGGG GTCGTACCCC TGAGCAGTTG TTGCTGACCG ATCACAATGG CGTGGTCATC CTCACCTCGC GGCCCGACTG GCGCTTTCGT GCCACCCGTG TGCTGAGCGA GGCCGAGCGC CAGGCCATCA TCGCCATCCA GCCCTACCCG ACCCAGGCCC CGCAACCGCT GGTACTCAGC CCGGACGCCT GGATCTCCCA AACCCGCGAC ATCAAGGAAA CCGGCTGGCA AGTGAGCATC CTTGCCCCAC GCACACTGGT CGACCGCTCG GTACAGACGG TGATGGCAAT CGGCGCCGGC ACCTTGCTGG TGGTAATGCT GCTGGCCGGG CTGGTGATGC AGCGGCGGCG CCATTACATC GACCGCATCG ACTTCGAGGC CCGTGGCCGC CAAGAGCTGG AAAAACGTGT AGCCGAACGT ACCGCCGACC TCGAAGGCCT GAACACCCGC CTGAAAAGCG CCGTGCTGGA ACGCGAGAAC GCTCAGCAGG AAGCCGTGCG CGCCCAGGAC GAACTGGTGC AGGCCGGCAA GCTGTCGGTA CTGGGCACCA TGTCGGCCAG CATCAGCCAT GAGCTGAACC AGCCGCTGGC GGCCATTCGC AGCTACGCGG AAAACGCCGA GATCCTACTC GACCACCAAC GCACCGAAGA CGCACGCGGC AACCTCAAGC TGATCGGCGA GCTGACCGGG CGCATGGCCT CGATCATCGC CCACCTGCGC GCCTTCGCCC GCCGCGACCG CCACGCCCCG GAAAGCGTGG CCCTGCAGCC GGCCCTGGAC GATGCCCTGG CGCTGCTGGC CAAACGCCGC CGGGCAATGG CCGTAGAGCT GATCCGCGAC CTGCCTGAAG CCACTTTGTG GGTACAGGCC GGTGAAACCC GACTGCGCCA GGTGCTGGGC AACCTGCTGG CCAATGCCCT CGATGCCCTG ACCGAAAAGG CCAACCCGCG CCGTTTGTGG CTAAGTGCCG AGCAACGTGA TGGCTGCGTC TACCTGTACA TCCGCGACAA CGGCCCCGGT TTCAGCCGCC AGGCCCTGGA GCACGCCAAG GAGCCGTTCT TCACCACCAA GACCCGTACC CAGGGCTTGG GCCTTGGCCT GGCCATCTGC GAAAGCCTGA TGCGCGCCCT GGGCGGTGAA CTGCTGCTGG CCAACCACCC GGAAGGTGGC GCACTGCTGA CCCTGCAGCT GCGTGTGGCC GCGCCTGGCG CTACTTTGCC CAATTCGGAG GACCCCTCGG CATGA
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Protein sequence | MIAKPTPPRR PRWRSLALLA LCLAPLLWPL HHLAERYYQQ ELASQNRQTL DLYVANLLGT LHRYETLPQI LGDLPALRGV LADPFRLEAV TNANRLLKDI VQQTGAEVMY LMDVSGNTLA ASNWDKHDSF VGRNFAFRPY FNEAMAGHLG RFFGQGTTSA KRGYFFAAAV RDRERTVGVL VVKVDLDHTE TLWGRTPEQL LLTDHNGVVI LTSRPDWRFR ATRVLSEAER QAIIAIQPYP TQAPQPLVLS PDAWISQTRD IKETGWQVSI LAPRTLVDRS VQTVMAIGAG TLLVVMLLAG LVMQRRRHYI DRIDFEARGR QELEKRVAER TADLEGLNTR LKSAVLEREN AQQEAVRAQD ELVQAGKLSV LGTMSASISH ELNQPLAAIR SYAENAEILL DHQRTEDARG NLKLIGELTG RMASIIAHLR AFARRDRHAP ESVALQPALD DALALLAKRR RAMAVELIRD LPEATLWVQA GETRLRQVLG NLLANALDAL TEKANPRRLW LSAEQRDGCV YLYIRDNGPG FSRQALEHAK EPFFTTKTRT QGLGLGLAIC ESLMRALGGE LLLANHPEGG ALLTLQLRVA APGATLPNSE DPSA
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