| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0288 |
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| Symbol | |
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| ID | 5867985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 334856 |
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| End bp | 336262 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641545368 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001666537 |
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| Protein GI | 167031306 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG AGACACTGAT CGACAGCCGA GCCCAGGTCA TCCTGGTCGA CGATGCCCCC
CACCTGCGCC AGGCCTTGAG CCAGACCCTG GACCTGGCAG GGCTCAAGGT AGTCGCCTTG
GCCGATGCCC AAGGCCTGGC CGAGCGAATC GAGGCCGACT GGCCGGGCGT GGTGGTCAGC
GACATCCGCA TGCCCGGTAT CGATGGCTTG CAGTTGCTGG AACAACTGCA CAGCCGCGAC
AGCGAACTAC CGGTGCTGCT GATTACCGGC CATGGCGATG TGCCGCTGGC AGTGCAGGCA
ATGCGCGCCG GGGCTTATGA CTTCCTGGAA AAGCCGTTTG CCACGGACGC CCTGCTCGAC
AGCGTGCGCC GCGCCCTGGC CCTGCGCCGC CTGGTGCTGG ACAACCGCAG CCTGCGCCTG
GCGCTAAGCG ACCGTCAGCA GCTGGCCACC CGCCTGGTGG GCCATTCACC GGCCATGCAG
CGCCTGCGCG AGCAAATCGG CGCCTTGGCC GGCACCCGTG CCGATGTGCT GATTTTGGGC
GAAACCGGCG CAGGCAAAGA GGTGGTGGCC CGTGCCCTGC ACGACCTTTC CAGCCGCCGC
GACGGCCCGT TCGTGGCGAT CAACGCGGGG GCACTGGCCG AGTCGGTGGT CGAAAGCGAG
CTGTTCGGCC ATGAGCCCGG CGCGTTCACC GGCGCGCAGA AGCGGCGCAT CGGCAAGTTC
GAATTTGCCA ACGGCGGCAC GCTGTTTCTC GATGAAATCG AGAGCATGAG CCTGGATGTT
CAGGTGAAAC TGCTGCGCAT GCTGCAAGAG CGGGTGGTCG AACGCCTGGG CGGCAACCAG
CTTATCCCGC TGGATATCCG CATCATCGCT GCCACCAAGG AAGACCTGCG TCAGGCCGCA
GACCAGGGGC GCTTCCGCGC CGACTTGTAT TACCGCCTTA ACGTCGCACC GCTGCGTATT
CCGCCGCTGC GCGAACGCGG CGATGACATT CTGGTGTTGT TCCAGCATTT CGCCGATGCC
GCCAGCCAGC GACATGGCCT GTCACCGCAC GCGCTGCAGC CAGCACAACG AGCCCTGCTG
CTGCGTCACG ACTGGCCGGG TAATGTGCGC GAACTGCAGA ACGCCGCCGA GCGCTTCGCC
CTTGGCCTGG AACTGGCCCT GGATGGCCAG GCACCTCCGG CAGCAGCACC CGCAGCACCA
TTGCTGAGCG GCAACCTCAG CGAGCAGGTG GAGCAGTTCG AACGCTCGCT GATCGCTGCC
GAACTGGCCC AGCCACACAG CTCCATGCGC AGCTTGGCCG AGGCGCTGGG CATCCCCCGC
AAAACCCTGC ACGACAAACT GCGCAAGCAT GGCTTGAACT TCGACGGAGG CAGTGGCGGG
CATGACGAAC AAGAGGACAA TCGTTAA
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| Protein sequence | MTTETLIDSR AQVILVDDAP HLRQALSQTL DLAGLKVVAL ADAQGLAERI EADWPGVVVS
DIRMPGIDGL QLLEQLHSRD SELPVLLITG HGDVPLAVQA MRAGAYDFLE KPFATDALLD
SVRRALALRR LVLDNRSLRL ALSDRQQLAT RLVGHSPAMQ RLREQIGALA GTRADVLILG
ETGAGKEVVA RALHDLSSRR DGPFVAINAG ALAESVVESE LFGHEPGAFT GAQKRRIGKF
EFANGGTLFL DEIESMSLDV QVKLLRMLQE RVVERLGGNQ LIPLDIRIIA ATKEDLRQAA
DQGRFRADLY YRLNVAPLRI PPLRERGDDI LVLFQHFADA ASQRHGLSPH ALQPAQRALL
LRHDWPGNVR ELQNAAERFA LGLELALDGQ APPAAAPAAP LLSGNLSEQV EQFERSLIAA
ELAQPHSSMR SLAEALGIPR KTLHDKLRKH GLNFDGGSGG HDEQEDNR
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