| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0269 |
|---|
| Symbol | |
|---|
| ID | 5867966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 316514 |
|---|
| End bp | 316897 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641545349 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001666518 |
|---|
| Protein GI | 167031287 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.357233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTAC CGCGCGAATA CGTCGAAAGC GCCTTCAGCC AACTGCTGGG CTGCCGCCTG
CAACGCCTGG ATACCGGTGT TGCCGAGGTG GCCCTGGCCC TCGAGCCGCA CTTGCGCAAC
CGTGGCCAGA AGCTGCACGG CGGGGCCATC TTCAGCCTGG TGGACATCGC CATGGGCCTG
GCCTGCTCGG CCAGCCATGG CTTTGACCAG CAAAGCGTCA CCATCGAGTG CAAGATCAAC
TACATGCGCG CCGTCAGCGA CGGTGAAGTG CTGTGTACCG CCCGTGTACT GCACGCCGGG
CGGCGCACCC TGGTGGTCGA CGCTGACGTA GTCCAGGGCG ACAAGCTGGT GGCAAAAGCG
CAAGGAACCT TCGCGGTTCT CTAG
|
|---|
| Protein sequence | MDVPREYVES AFSQLLGCRL QRLDTGVAEV ALALEPHLRN RGQKLHGGAI FSLVDIAMGL
ACSASHGFDQ QSVTIECKIN YMRAVSDGEV LCTARVLHAG RRTLVVDADV VQGDKLVAKA
QGTFAVL
|
|---|
| |