Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0263 |
Symbol | |
ID | 5867960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 306657 |
End bp | 307454 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545343 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001666512 |
Protein GI | 167031281 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.791848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGTG CAACTTCCTC CAACCTGGCC CAGCGCCTGG CGCCCTGGGC GTTGCCGGTG CTGCTGTTGG CAGCCTGGCA GCTGGCGGTC AGTGCTGGCT GGCTGTCGAC GCGCATTCTG CCGGCGCCCA GCGCAGTGGT CAGCGCCGGT GTCGAGCTGG TGCGCAGCGG CGAAATCTGG ACCCACCTGG CCATCAGTGG CTGGCGTGCC GGGCTGGGCT TCGTCATCGG CGGCAGCATC GGCCTGGTGC TGGGCTTCAT CACCGGCCTG TCGAACTGGG GCGAACGCCT GCTCGACAGC TCGGTGCAGA TGATCCGCAA CGTGCCGCAC TTGGCGCTGA TCCCACTGGT GATCCTGTGG TTCGGTATCG ACGAGTCGGC AAAGATCTTC CTGGTCGCGT TAGGCACGTT GTTCCCGATC TACCTGAACA CCTACCACGG CATCCGCAAC GTCGACCCGG CGCTGGTGGA AATGGCACGC AGCTACGGCT TGTCCGGCTT CGGCCTGTTC CGCCAGGTGA TCCTGCCGGG GGCGCTGCCT TCGATCCTGG TGGGCGTGCG CTTCGCTCTG GGCTTCATGT GGCTGACGTT GATCGTTGCC GAAACCATCT CGGCCAACGC TGGTATCGGT TACCTGGCAA TGAACGCCCG TGAGTTCCTG CAGACCGACG TGGTGGTGCT GGCCATCGTC CTGTATGCCG TGCTCGGCAA GCTCGCCGAC CTCGCCGCTC GTGGCCTGGA ACGCGTGTGG CTGCGTTGGC ACCCAGCCTA CCAAGTGGCC AAGAAGGAGG GCGCATGA
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Protein sequence | MSRATSSNLA QRLAPWALPV LLLAAWQLAV SAGWLSTRIL PAPSAVVSAG VELVRSGEIW THLAISGWRA GLGFVIGGSI GLVLGFITGL SNWGERLLDS SVQMIRNVPH LALIPLVILW FGIDESAKIF LVALGTLFPI YLNTYHGIRN VDPALVEMAR SYGLSGFGLF RQVILPGALP SILVGVRFAL GFMWLTLIVA ETISANAGIG YLAMNAREFL QTDVVVLAIV LYAVLGKLAD LAARGLERVW LRWHPAYQVA KKEGA
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