| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0261 |
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| Symbol | |
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| ID | 5867958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 304472 |
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| End bp | 305437 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545341 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001666510 |
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| Protein GI | 167031279 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.766816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTG TCTTCTTGCG TCGCGGTCTG GTCGCCCTGT TTGCGGCGGC TGTGTCCTTC
GGCGCCATTA CTCAAGCCCA GGCCGAAAGC CTGCGTATCG GTTACCAGAA ATACGGCACC
TTGGTGCTGC TCAAGGCCAA GGGCACGCTG GAGAAGCGCC TGGCCGAGCA GGGCGTGCAG
GTGCAGTGGA CCGAATTCCC CGGTGGCCCG CAGCTCCTCG AAGGGCTCAA CGTCGGGTCC
ATCGATTTCG GCGTAACAGG CGAAACCCCG CCCGTGTTCG CCCAAGCCGC TGGTGCCGAT
CTGCTCTACG TGGCCTACGA GCCGCCTGCG CCGCACAGCG AGGCGATTCT GGTGCCGAAG
GGCTCGCCGA TCCAGTCGGT GAAGGACCTC AAGGGCAAAA AAGTCGTTCT CAACAAAGGC
TCCAACGTGC ACTACCTGTT GGTGCGCGCC CTGGAAGACG CCGGCCTCAA ATACAGCGAT
ATCCAGCCGG TCTACCTGCC CCCGGCCGAT GCCCGCGCGG CGTTCGAGCG TGGCAGCGTC
GATGCCTGGG TGATTTGGGA CCCTTACCAG GCCGCCGCCG AACAACAGCT GCAAGCGCGC
ACCCTGCGTG ACGGCAAGGG CCTGGTCGAC AACCATCAGT TCTACCTGGC CACCCGCAAC
TACGCGACCC AGCACCCGGC AGTGATCAAC ACGGTGATCG AGGAAGTGCG CGCCGTGGGC
GAGTGGTCCC AGGCCAACCC GCAGGAAGTG ACCGACCAGG TCGCACCGCT GCTCGGCCTG
CCCGCCGACA TCACCCTGAC CTCGGTCAAG CGTCAAGGCT ATGGTGCCGC GCCACTGACG
CCAGAGGTAG TGGCTGCGCA ACAGAAGATC GCCGACACCT TCCAGGCGCT CAAGCTGATA
CCCAAGCCGC TGAGCATCAA GGACGTGATC TGGACACCCC CGGCCAAGGT CGCTAGCGCG
CCTTGA
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| Protein sequence | MRTVFLRRGL VALFAAAVSF GAITQAQAES LRIGYQKYGT LVLLKAKGTL EKRLAEQGVQ
VQWTEFPGGP QLLEGLNVGS IDFGVTGETP PVFAQAAGAD LLYVAYEPPA PHSEAILVPK
GSPIQSVKDL KGKKVVLNKG SNVHYLLVRA LEDAGLKYSD IQPVYLPPAD ARAAFERGSV
DAWVIWDPYQ AAAEQQLQAR TLRDGKGLVD NHQFYLATRN YATQHPAVIN TVIEEVRAVG
EWSQANPQEV TDQVAPLLGL PADITLTSVK RQGYGAAPLT PEVVAAQQKI ADTFQALKLI
PKPLSIKDVI WTPPAKVASA P
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