Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0255 |
Symbol | |
ID | 5867952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 298234 |
End bp | 299073 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641545335 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001666504 |
Protein GI | 167031273 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.796344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCC TGGACCTGCC GGTCGCCGGC AAACACGACA CCCAAGCCCG GCCAGCCGCC AAGCTGCGCC GCCCACTGTC CACCCGCTGG ATCAGCACCC TGACCCTGAC CAGCCTGCTG CTGGCCTGGT GGCTGGTGAC GGCCGCCGGC TGGATCGAGC CGCTGTTCCT GCCCTCGCCC GGCGACATCC TGGCCAGGGC CTGGACACTG CTCACCCAAG GCTACATGGA CGCCAGCCTG TGGCAGCACC TGGGCGCCAG CCTGGGCCGC ATCGGCTTGG CCCTGCTGGC CGCCACCCTC ACCGCCATCC CGGTGGGCAT CGCCATCGGC TACAACCGCG TGGCGCGCGG CATTCTCGAC CCGCTGATCG AGTTCTATCG GCCGATCCCA CCGCTGGCCT ACCTGCCGCT GATCGTCATC TGGTGCGGTA TCGGCGAGCT GTCCAAGGTG CTGCTGATCT ACCTGGCCAT CTTCGCCCCC ATCGCCATTG CCACCGCCAC CGGTGTGCGC ACGGTCGACC CGGCCAAGCT GCGGGCGGCG CAGTCGCTGG GTGCGACCAA GGCCCAGCTG ATCCGCCATG TGATCCTGCC CAGTGCGCTG CCCGACATCC TTACCGGCAT CCGCATCGGC CTGGGCGTCG GCTGGTCGAC CCTGGTCGCC GCCGAACTGA TCGCCGCCAC CAGCGGCCTG GGCTTCATGG TGCAGTCGGC GGCGCAGTTC CTGGTCACCG ACGTGGTGGT GCTGGGCATT CTGCTGATCG CCCTGATCGC CTTCGCCCTG GAAATGAGCC TGCGTGCCCT GCAACGCAAA CTGGTGCCCT GGCATGGGCA GAGCCACTGA
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Protein sequence | MSSLDLPVAG KHDTQARPAA KLRRPLSTRW ISTLTLTSLL LAWWLVTAAG WIEPLFLPSP GDILARAWTL LTQGYMDASL WQHLGASLGR IGLALLAATL TAIPVGIAIG YNRVARGILD PLIEFYRPIP PLAYLPLIVI WCGIGELSKV LLIYLAIFAP IAIATATGVR TVDPAKLRAA QSLGATKAQL IRHVILPSAL PDILTGIRIG LGVGWSTLVA AELIAATSGL GFMVQSAAQF LVTDVVVLGI LLIALIAFAL EMSLRALQRK LVPWHGQSH
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