Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0251 |
Symbol | |
ID | 5867948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 292958 |
End bp | 293752 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641545331 |
Product | cystine transporter subunit |
Protein accession | YP_001666500 |
Protein GI | 167031269 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAT TCGCCAAACC GCTACTCAAC GCCAGCCTGG CCCTCCTGCT GGGTGCCGGC CTGCTCGGCC AGGCCTTCGC CGGCGAGCAA TTGAAGACTA TCCAGGAAAA AGGCGTGATC AACGTCGGCC TGGAAGGTAC CTACCCACCG TTCAGTTTCC AGGATGAGAA CGGCAAGCTG GCCGGCTTCG AGGTGGAGCT TTCGGAACTC CTGGCCAAGG AGCTGGGGGT CAAGGCCAAG ATCCAGCCAA CCAAGTGGGA CGGCATCCTT GCCGCGCTGG AGTCCAAGCG CCTGGACGTA GTGGTCAATC AGGTGACCAT CTCTGAAGAG CGCAAGAAGA AATACGACTT CTCCGAGCCC TACACCGTTT CCGGTATCCA GGCCCTGATC CTGAAGAAGA AAGCCGAGCA GCTGAACATC AAGTCGGCGC AAGACCTGGC CGGCAAGAAA GTCGGTGTGG GCCTGGGCAC CAACTACGAG CAGTGGGTCA AGCAGGATGT CCCGAAAGCC GAAGTGCGTA CCTATGAAGA CGACCCGAGC AAGTTCGCCG ACCTGCGCAA CGGCCGCATC GACGCCATCC TGATCGACCG CCTGGCCGCG CTGGAATACG CGCAAAAAGC CAAGGACACC GAGCTTGCCG GCGATGCCTT CTCGCGCCTG GAAAGCGGCG TAGCCCTGCG CAAGGGCGAG CCTGAGCTGC TGGCAGCGAT CAACAAGGCC ATCGACAAGC TCAAGGCTGA CGGCACGCTG GCCAAGCTGT CCGAAAAATA CTTCGGTGCC GATGTCACCA AATGA
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Protein sequence | MSKFAKPLLN ASLALLLGAG LLGQAFAGEQ LKTIQEKGVI NVGLEGTYPP FSFQDENGKL AGFEVELSEL LAKELGVKAK IQPTKWDGIL AALESKRLDV VVNQVTISEE RKKKYDFSEP YTVSGIQALI LKKKAEQLNI KSAQDLAGKK VGVGLGTNYE QWVKQDVPKA EVRTYEDDPS KFADLRNGRI DAILIDRLAA LEYAQKAKDT ELAGDAFSRL ESGVALRKGE PELLAAINKA IDKLKADGTL AKLSEKYFGA DVTK
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