| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0240 |
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| Symbol | |
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| ID | 5867937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 280197 |
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| End bp | 281225 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545320 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001666489 |
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| Protein GI | 167031258 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCG CACGCTTTCA CGTTGAGACC CGCTTCGTGC ACATGGCCAA GAACATTCCA
ACGACATTGC CCGGCACCCC ACCTCCCGAA GCCGCCCAGA CGTTACTGGC ACTCCTCCAC
GCCCAAGGCG AGGTTGCCCG CCTGAGTGAG CGCGATCAGC TGTTCAGCTC GCTGCTCGAC
AGCGTCAATG CGGTGCTCTG GGCCTTCGAC TGGGAAACCC GCCAGGTGCT GTATGTGAGC
CCCGCCTACG AACGCATCTT TGGCCGCCCC GTCAGCCTGG TGCTGGCCGA CTACAACGAA
TGGCGTGACA GTATTTACCC CGATGACCTC GAGTTCGCCG AACGCAGCCT GGCCCAGGTG
CTGCTCAAGG GCGCAGTGGA AGACCGCGAA TACCGTATCC TCAATGCCGA CGGGCAACTG
CGCTGGTTGA GCGACAAGTG CTACATCAAC CAGCAGCACG ATGGCGACCG GGTGATCATT
GTCGGTATCG CCGAAGACAT CACCGAAAAG AAGCAGCTTG AAGGGGAGCT GCAGCGCCTG
GCCACCACCG ATGTGCTGAC CCAGAGCAGC AACCGCAGGC ACTTCTTCGA GTGTGCTCAG
CAAGCGTTCG ACAGCGCCCG CGAAGACGGC ACGCCGCTGG CCTTTCTGTT GCTGGATATC
GATGACTTCA AGCGCATCAA CGACAGTTAC GGCCACCAGG AAGGCGATCA GGTGCTGCAA
CACATCGCCG ACAGCGGCAA AGCCGTGCTA CGCCGTGGCG ACCTGTTCGG GCGCATTGGC
GGCGAGGAGT TCGCAGCGGT GTTCCCAGGT TGCAACGCCG AGGTCGCAGA ACAGATTGCC
GAGCGTTTGC AGCGGCAGAT TCAGCGCTTG AGCTTCAGCC ATGGGCAGCA GACCTACGGG
GTGACGGTGA GCCAGGGGCT GACCGGGCTG ACCGAAGAGG ATGTAACGCT GGATAGCCTG
TATGCCCGAG CCGATGCGGC GATGTACCAA GCCAAGCGGC AAGGCAAGAA CCAGATAGTC
CGCGGCTGA
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| Protein sequence | MLAARFHVET RFVHMAKNIP TTLPGTPPPE AAQTLLALLH AQGEVARLSE RDQLFSSLLD
SVNAVLWAFD WETRQVLYVS PAYERIFGRP VSLVLADYNE WRDSIYPDDL EFAERSLAQV
LLKGAVEDRE YRILNADGQL RWLSDKCYIN QQHDGDRVII VGIAEDITEK KQLEGELQRL
ATTDVLTQSS NRRHFFECAQ QAFDSAREDG TPLAFLLLDI DDFKRINDSY GHQEGDQVLQ
HIADSGKAVL RRGDLFGRIG GEEFAAVFPG CNAEVAEQIA ERLQRQIQRL SFSHGQQTYG
VTVSQGLTGL TEEDVTLDSL YARADAAMYQ AKRQGKNQIV RG
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