Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0212 |
Symbol | |
ID | 5867908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 248884 |
End bp | 249651 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641545291 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_001666461 |
Protein GI | 167031230 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.475879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCAAT GGCGCCTGTT GCTGACCCGG CCTGCCGAGG ACTGCGCGGC ACTGGCGCAA AGCCTGGCGG AGGAGGGCGT GGGCAGCAGT TGCCTGCCAC TGCTGGCGAT TGAGCCCGTT ACGTTAGAGA CCCCGCAGCG ATTGTTACTG GAAGGCCTGC ACGGCTTCCA GGCAATCATC GTGGTTAGCA AGCCGGCCGC CCGCCTGTTG CTTGAGCAAC TGGCCAAGGC CAGCCTTCAG CCGCCACGCC AAGGCTGGTT CACGGTGGGC GAGGCAACCG CTGCGGTGCT GCAGGGGGCG GGGTTGGAGG TGAGCGCTCC GCCGCGTGGC GATGACAGCG AAGCCTTGCT GGCGCTGCCG GCCCTGCGCC AGGCAGTTGC CGCGCCGGCA CCGCGTGTGT TGATCGTTCG CGGCGTCGGA GGTCGCGAAC TGCTGGCAGA GCGTCTTGCA GAGCAAGGTG CTAGTGTCGA ATATCTGGAA CTGTATCGTC GCTGCCTGCC GGTATACCCG GCGGGTACGC TGATGCGCCG CATCGAAGCG GAACGCCTCA ATGGCCTGGT GGTCAGCAGT GGGCAGGGTT TTGAACATTT GCAGCAGCTG GCCGGTGCGG ATTGGCCGCA GCTGGCACGC CTGCCGCTGT TCGTGCCCAG CCCACGGGTC GCCGAGCAGG CCAGGGCCGC CGGGGCCCAA CAGGTTGTGG ATTGCCGTGG CGCCAGTGCC ACGGCCTTGC TGGCAGCCGT GCAGCGTAGC GCTGCACCTG CCTCTTAA
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Protein sequence | MSQWRLLLTR PAEDCAALAQ SLAEEGVGSS CLPLLAIEPV TLETPQRLLL EGLHGFQAII VVSKPAARLL LEQLAKASLQ PPRQGWFTVG EATAAVLQGA GLEVSAPPRG DDSEALLALP ALRQAVAAPA PRVLIVRGVG GRELLAERLA EQGASVEYLE LYRRCLPVYP AGTLMRRIEA ERLNGLVVSS GQGFEHLQQL AGADWPQLAR LPLFVPSPRV AEQARAAGAQ QVVDCRGASA TALLAAVQRS AAPAS
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