Gene PputGB1_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0209 
Symbol 
ID5867905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp245336 
End bp246730 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content64% 
IMG OID641545288 
Productargininosuccinate lyase 
Protein accessionYP_001666458 
Protein GI167031227 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.822129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACAAGACCAA TCAGTCCTGG GGCGGCCGCT TCAGTGAGCC CGTCGACGCC 
TTCGTCGCCC GTTTCACCGC CTCGGTCGAT TTCGACAAGC GCCTGTACCG CCACGACATC
ATGGGTTCGA TCGCCCATGC CACCATGCTG GCGCAGGTCG GCGTGCTCAG CGATGCCGAG
CGCGACACCA TCATCGATGG CCTGAAAACC ATCCAGGGCG AGATCGAAGC CGGTAACTTC
GACTGGCGCG TCGACCTCGA AGACGTGCAC ATGAACATCG AAGCACGCCT GACTGACCGC
ATCGGCATCA CCGGTAAGAA GCTGCACACA GGCCGTAGCC GCAACGACCA GGTGGCCACC
GACATCCGCC TGTGGCTGCG CGACGAAATC GACCTGATCC TGGCCGAAAT AACCCGCCTG
CAGCAGGGCC TGCTGGAGCA GGCCGAGCGC GAAGCCGAAA CCATCATGCC CGGCTTCACT
CACCTGCAAA CCGCGCAGCC GGTCACCTTC GGCCACCACC TGCTGGCCTG GTTCGAAATG
CTCAGCCGCG ACTACGAGCG CCTGGTCGAC TGCCGCAAGC GCGCCAATCG CATGCCACTG
GGCAGCGCGG CGTTGGCTGG TACCACCTAC CCGATCGACC GCGAGCTCAC CTGCAAGCTG
CTGGGCTTCG AAGCCGTGGC CGGCAACTCG CTGGACGGCG TGTCGGACCG TGACTTCGCC
ATCGAATTCT GCGCTGCTGC CAGCGTGGCG ATGATGCACC TGTCGCGCTT CTCCGAAGAG
CTGGTGCTGT GGACCAGCGC GCAGTTCCAG TTCATCGACC TGCCCGACCG CTTCTGCACC
GGCAGCTCGA TCATGCCGCA GAAAAAGAAC CCGGACGTGC CAGAGCTGGT GCGCGGCAAG
ACCGGCCGCG TGTTTGGCGC TTTGACCGGC CTGCTGACCC TGATGAAAGG CCAGCCGTTG
GCCTACAACA AGGACAACCA GGAAGACAAG GAACCGCTGT TCGACGCCGC CGACACCCTG
CGCGACTCGC TGCGTGCCTT TGCCGACATG ATCCCGGCGA TCAAGCCCAA GCACGCCATC
ATGCGTGAAG CGGCCCTGCG CGGCTTCTCC ACCGCCACCG ACCTGGCCGA CTACCTGGTA
CGCCGTGGCC TGCCGTTCCG TGACTGCCAC GAAATCGTTG GCCACGCGGT GAAGTATGGT
GTGGACACCG GCAAGGACCT GGCCGAGATG AGCCTGGACG AACTGCGCCA GTTCAGCGAC
CAGATCGAGC AAGACGTGTT TGCCGTGCTC ACTCTGGAAG GCTCGGTGAA TGCCCGTAAC
CACATTGGTG GTACGGCGCC GGCGCAAGTG CGTGCGGCGG TGGTTCGCGG CAAGGCGCTG
CTGGCTTCGC GCTGA
 
Protein sequence
MSTDKTNQSW GGRFSEPVDA FVARFTASVD FDKRLYRHDI MGSIAHATML AQVGVLSDAE 
RDTIIDGLKT IQGEIEAGNF DWRVDLEDVH MNIEARLTDR IGITGKKLHT GRSRNDQVAT
DIRLWLRDEI DLILAEITRL QQGLLEQAER EAETIMPGFT HLQTAQPVTF GHHLLAWFEM
LSRDYERLVD CRKRANRMPL GSAALAGTTY PIDRELTCKL LGFEAVAGNS LDGVSDRDFA
IEFCAAASVA MMHLSRFSEE LVLWTSAQFQ FIDLPDRFCT GSSIMPQKKN PDVPELVRGK
TGRVFGALTG LLTLMKGQPL AYNKDNQEDK EPLFDAADTL RDSLRAFADM IPAIKPKHAI
MREAALRGFS TATDLADYLV RRGLPFRDCH EIVGHAVKYG VDTGKDLAEM SLDELRQFSD
QIEQDVFAVL TLEGSVNARN HIGGTAPAQV RAAVVRGKAL LASR