Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0209 |
Symbol | |
ID | 5867905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 245336 |
End bp | 246730 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545288 |
Product | argininosuccinate lyase |
Protein accession | YP_001666458 |
Protein GI | 167031227 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0165] Argininosuccinate lyase |
TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.822129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCG ACAAGACCAA TCAGTCCTGG GGCGGCCGCT TCAGTGAGCC CGTCGACGCC TTCGTCGCCC GTTTCACCGC CTCGGTCGAT TTCGACAAGC GCCTGTACCG CCACGACATC ATGGGTTCGA TCGCCCATGC CACCATGCTG GCGCAGGTCG GCGTGCTCAG CGATGCCGAG CGCGACACCA TCATCGATGG CCTGAAAACC ATCCAGGGCG AGATCGAAGC CGGTAACTTC GACTGGCGCG TCGACCTCGA AGACGTGCAC ATGAACATCG AAGCACGCCT GACTGACCGC ATCGGCATCA CCGGTAAGAA GCTGCACACA GGCCGTAGCC GCAACGACCA GGTGGCCACC GACATCCGCC TGTGGCTGCG CGACGAAATC GACCTGATCC TGGCCGAAAT AACCCGCCTG CAGCAGGGCC TGCTGGAGCA GGCCGAGCGC GAAGCCGAAA CCATCATGCC CGGCTTCACT CACCTGCAAA CCGCGCAGCC GGTCACCTTC GGCCACCACC TGCTGGCCTG GTTCGAAATG CTCAGCCGCG ACTACGAGCG CCTGGTCGAC TGCCGCAAGC GCGCCAATCG CATGCCACTG GGCAGCGCGG CGTTGGCTGG TACCACCTAC CCGATCGACC GCGAGCTCAC CTGCAAGCTG CTGGGCTTCG AAGCCGTGGC CGGCAACTCG CTGGACGGCG TGTCGGACCG TGACTTCGCC ATCGAATTCT GCGCTGCTGC CAGCGTGGCG ATGATGCACC TGTCGCGCTT CTCCGAAGAG CTGGTGCTGT GGACCAGCGC GCAGTTCCAG TTCATCGACC TGCCCGACCG CTTCTGCACC GGCAGCTCGA TCATGCCGCA GAAAAAGAAC CCGGACGTGC CAGAGCTGGT GCGCGGCAAG ACCGGCCGCG TGTTTGGCGC TTTGACCGGC CTGCTGACCC TGATGAAAGG CCAGCCGTTG GCCTACAACA AGGACAACCA GGAAGACAAG GAACCGCTGT TCGACGCCGC CGACACCCTG CGCGACTCGC TGCGTGCCTT TGCCGACATG ATCCCGGCGA TCAAGCCCAA GCACGCCATC ATGCGTGAAG CGGCCCTGCG CGGCTTCTCC ACCGCCACCG ACCTGGCCGA CTACCTGGTA CGCCGTGGCC TGCCGTTCCG TGACTGCCAC GAAATCGTTG GCCACGCGGT GAAGTATGGT GTGGACACCG GCAAGGACCT GGCCGAGATG AGCCTGGACG AACTGCGCCA GTTCAGCGAC CAGATCGAGC AAGACGTGTT TGCCGTGCTC ACTCTGGAAG GCTCGGTGAA TGCCCGTAAC CACATTGGTG GTACGGCGCC GGCGCAAGTG CGTGCGGCGG TGGTTCGCGG CAAGGCGCTG CTGGCTTCGC GCTGA
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Protein sequence | MSTDKTNQSW GGRFSEPVDA FVARFTASVD FDKRLYRHDI MGSIAHATML AQVGVLSDAE RDTIIDGLKT IQGEIEAGNF DWRVDLEDVH MNIEARLTDR IGITGKKLHT GRSRNDQVAT DIRLWLRDEI DLILAEITRL QQGLLEQAER EAETIMPGFT HLQTAQPVTF GHHLLAWFEM LSRDYERLVD CRKRANRMPL GSAALAGTTY PIDRELTCKL LGFEAVAGNS LDGVSDRDFA IEFCAAASVA MMHLSRFSEE LVLWTSAQFQ FIDLPDRFCT GSSIMPQKKN PDVPELVRGK TGRVFGALTG LLTLMKGQPL AYNKDNQEDK EPLFDAADTL RDSLRAFADM IPAIKPKHAI MREAALRGFS TATDLADYLV RRGLPFRDCH EIVGHAVKYG VDTGKDLAEM SLDELRQFSD QIEQDVFAVL TLEGSVNARN HIGGTAPAQV RAAVVRGKAL LASR
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