| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0203 |
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| Symbol | |
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| ID | 5867899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 239496 |
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| End bp | 240371 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545282 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001666452 |
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| Protein GI | 167031221 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC CTTTGCTGAC CCTGGGCCGT GTGGTCCTGA CCTTGCTGGT AGTGACCTTC
GCCGCCGTGC TCGTGTGGCA GATGGTGGTG TACTACATGT TTGCCCCCTG GACCCGCGAC
GGCCACATCC GCGCCGACGT GATCCAGATC GCCCCGGACG TGTCGGGGTT GATCCAGAAG
GTCGAGGTGC GCGACAACCA GACCGTCAAG CGCGGCGACG TGCTGTTCAC CATCGACCAG
GACCGCTTCA GCCTGGCTCT GCGCCAGGCC AAGGCAACCC TCGGCGAACG CCAGGAAACC
CTGGCCCAGG CTTCGCGCGA AGCGCAGCGC AACCGCAAGC TGGGCAACCT GGTGGCCGCC
GAGCAATTGG AAGAAAGCCA GTCTCGCGAG GCCCGCGCCC GTTCGGCCGT CAGCGAGGCG
CAGGTGGCGG TCGATACTGC CCAGCTCAAC CTTGACCGTT CGGTCGTGCG CAGCCCGGTG
GATGGCTACC TCAACGACCG CGCGCCGCGT AACCACGAAT TCGTCACCGC TGGCCGCCCG
GTGCTGTCGG TGGTCGACAG TGCCTCATAC CACGTCGACG GTTATTTCGA AGAAACCAAG
CTGGGTGGCA TCCAAATCGG CGACGCCGTG GACATCCGCG TCATGGGCGA CAACACCCGG
CTGCGCGGCC ACGTACAGAG CTTTGCCGCT GGCATCGAAG ACCGTGACCG CAGCAGCGGT
GCCAACCTGC TGCCCAACGT CAACCCGGCC TTCAGCTGGG TGCGCCTGGC TCAGCGCATT
CCGGTGCGCA TCGCCTTTGA CGAAGTGCCG CAAGACTTCC GCATGATCGC CGGGCGTACT
GCCACGGTGT CGATCATCGA GGGCCAGCGC CCATGA
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| Protein sequence | MKKPLLTLGR VVLTLLVVTF AAVLVWQMVV YYMFAPWTRD GHIRADVIQI APDVSGLIQK
VEVRDNQTVK RGDVLFTIDQ DRFSLALRQA KATLGERQET LAQASREAQR NRKLGNLVAA
EQLEESQSRE ARARSAVSEA QVAVDTAQLN LDRSVVRSPV DGYLNDRAPR NHEFVTAGRP
VLSVVDSASY HVDGYFEETK LGGIQIGDAV DIRVMGDNTR LRGHVQSFAA GIEDRDRSSG
ANLLPNVNPA FSWVRLAQRI PVRIAFDEVP QDFRMIAGRT ATVSIIEGQR P
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