| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0189 |
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| Symbol | |
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| ID | 5867886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 228867 |
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| End bp | 229886 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545270 |
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| Product | ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001666440 |
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| Protein GI | 167031209 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.366153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAATT CCATCAGCCG CTTGGCGGCA AGCATCGGCC TCGGCGCGAG CCTGGTCATC
GGCAGCCTGG CCGCCCCCGC TGCGGCCCAG GCCGAAGGCA AAATCCGCAT CGCCGAGCAG
TTCGGCATCG TTTACCTGCT GCTCAACGTG GTGCGTGACC AGCAACTGAT CGAGAAGCAC
GGCAAGGAGC AGGGCATCGA CATCGATGTC GACTGGGCGC AGTTGTCAGG TGGTTCGGCC
ATCAACGATG CACTGCTGTC CGGTTCGGTG GACATCGCCG GTGCCGGCGT CGGCCCGCTG
CTTACTGTGT GGGACCGCAC CAAGGGGCGG CAGAACGTCA AGGCTGTGGC TTCGCTGGGT
AACTTTCCAT ACTACCTGGT CAGCAGTAAC CCCAACGTGA AGACCATCGC CGACATCTCC
GACAAGGACC GCATCGCCGT GCCCGCGGTA GGTGTTTCGG TGCAGTCGCG CTTCCTGCAG
TACGCCGCCG CCCAGCAGTG GGGCGACAAG GAATACAACC GCCTCGACAA ATACACCCTG
GCAGTACCGC ACCCGGATGC CACTGCCGCG CTGCTGGCCG GTGGCACTGA GCTGAACGGG
CACTTCTCCA ACCCACCGTT CCAGGACCAG GTGCTGGCCA ACAAGGACGT GCATGTGGTG
CTCAACAGCT ACGACCTGCT TGGCCCCAAC TCGCCGACCT TGCTGTTCGC TACCGAGAAA
TTCCGCAAGG ACAACCCCAA AACCTACAAG GCCTTTGTCG ACGCCCTGGC CGAAGCCGCA
GACTTCGCTC AGAAGGACAA AGCCGCCGCA GCCGATACCT ACATCCGTGT GACCAAGGCC
AAGATCGACC GCGACGCGCT GATCAAGCTG ATCGACAACC CGCAGTACGA GTTCACCGTC
ACGCCAAAGA ACACCTACAA GCTGGCCGAC TTCCTCTATC GGGTAGGCGC TATCAAGAAC
AAGCCGGCAT CGTGGAAGGA CTACTTCTTC CAGGACGAAC GCCCGCTGCA GGGGAGCTGA
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| Protein sequence | MRNSISRLAA SIGLGASLVI GSLAAPAAAQ AEGKIRIAEQ FGIVYLLLNV VRDQQLIEKH
GKEQGIDIDV DWAQLSGGSA INDALLSGSV DIAGAGVGPL LTVWDRTKGR QNVKAVASLG
NFPYYLVSSN PNVKTIADIS DKDRIAVPAV GVSVQSRFLQ YAAAQQWGDK EYNRLDKYTL
AVPHPDATAA LLAGGTELNG HFSNPPFQDQ VLANKDVHVV LNSYDLLGPN SPTLLFATEK
FRKDNPKTYK AFVDALAEAA DFAQKDKAAA ADTYIRVTKA KIDRDALIKL IDNPQYEFTV
TPKNTYKLAD FLYRVGAIKN KPASWKDYFF QDERPLQGS
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