Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0157 |
Symbol | |
ID | 5867845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 161252 |
End bp | 162043 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641545230 |
Product | ABC transporter related |
Protein accession | YP_001666409 |
Protein GI | 167031178 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.961661 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGATC AGGATCGCGT CATCGAAGCC CGTGGCATCT GCAACCGCTT CGGCCGCCAG GTGGTGCATG AAAACCTCGA CCTTGACCTG TACCGTGGCG AAATCCTCGC CGTGGTCGGT GGCTCAGGTA GCGGCAAATC GGTGCTGCTA CGCAGCATCA TCGGCTTGCG CCGGCCCAAT GAAGGGCAGA TCAAGGTGTT CGGCCAGGAC TTGGCCGGCC TGCATGAAGA ACAGCGCTCG CTGGTCGAGC GGCGCTTTGG CGTGTTGTTT CAGAAGGGCG CGCTGTTCTC TTCGCTGACG GTGACCGAGA ACGTGGCCTT GCCCCTGATC GAGCACGCCG GGCTGTCCCG GGCCGATGCC GAGCACCTGG CCGGCGTGAA GCTGGCCCTG GCCGGGTTGC CGATCTCGGC CGCCGACAAG TACCCGGCCT CGTTGTCGGG GGGCATGATC AAGCGTGCGG CGCTGGCCCG CGCACTGGCC CTGGACCCGG ACATCCTGTT CCTCGACGAA CCCACCGCCG GCCTGGACCC GATCGGTGCC GCCGCGTTCG ACCAGTTGAT CCTCACCCTG CGCGATGCCC TGGGCCTGTC GGTGTTCCTC ATCACCCACG ACCTCGACAC CCTGTACACC ATCACCGACC GCATTGCGGT GCTGTCGCAG AAAAAAGTCC TGGTGGCCGG CCCGCTGGCC GAGGTCGAGC AGACCAACGA CGCCTGGATC CAAGAATACT TTCACGGCCC ACGCGGGCGC GCAGCCGAAC AGGCTGCCAC CCGTGCCGGG CAGGAGCGCT GA
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Protein sequence | MSDQDRVIEA RGICNRFGRQ VVHENLDLDL YRGEILAVVG GSGSGKSVLL RSIIGLRRPN EGQIKVFGQD LAGLHEEQRS LVERRFGVLF QKGALFSSLT VTENVALPLI EHAGLSRADA EHLAGVKLAL AGLPISAADK YPASLSGGMI KRAALARALA LDPDILFLDE PTAGLDPIGA AAFDQLILTL RDALGLSVFL ITHDLDTLYT ITDRIAVLSQ KKVLVAGPLA EVEQTNDAWI QEYFHGPRGR AAEQAATRAG QER
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