Gene PputGB1_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0157 
Symbol 
ID5867845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp161252 
End bp162043 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID641545230 
ProductABC transporter related 
Protein accessionYP_001666409 
Protein GI167031178 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.961661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATC AGGATCGCGT CATCGAAGCC CGTGGCATCT GCAACCGCTT CGGCCGCCAG 
GTGGTGCATG AAAACCTCGA CCTTGACCTG TACCGTGGCG AAATCCTCGC CGTGGTCGGT
GGCTCAGGTA GCGGCAAATC GGTGCTGCTA CGCAGCATCA TCGGCTTGCG CCGGCCCAAT
GAAGGGCAGA TCAAGGTGTT CGGCCAGGAC TTGGCCGGCC TGCATGAAGA ACAGCGCTCG
CTGGTCGAGC GGCGCTTTGG CGTGTTGTTT CAGAAGGGCG CGCTGTTCTC TTCGCTGACG
GTGACCGAGA ACGTGGCCTT GCCCCTGATC GAGCACGCCG GGCTGTCCCG GGCCGATGCC
GAGCACCTGG CCGGCGTGAA GCTGGCCCTG GCCGGGTTGC CGATCTCGGC CGCCGACAAG
TACCCGGCCT CGTTGTCGGG GGGCATGATC AAGCGTGCGG CGCTGGCCCG CGCACTGGCC
CTGGACCCGG ACATCCTGTT CCTCGACGAA CCCACCGCCG GCCTGGACCC GATCGGTGCC
GCCGCGTTCG ACCAGTTGAT CCTCACCCTG CGCGATGCCC TGGGCCTGTC GGTGTTCCTC
ATCACCCACG ACCTCGACAC CCTGTACACC ATCACCGACC GCATTGCGGT GCTGTCGCAG
AAAAAAGTCC TGGTGGCCGG CCCGCTGGCC GAGGTCGAGC AGACCAACGA CGCCTGGATC
CAAGAATACT TTCACGGCCC ACGCGGGCGC GCAGCCGAAC AGGCTGCCAC CCGTGCCGGG
CAGGAGCGCT GA
 
Protein sequence
MSDQDRVIEA RGICNRFGRQ VVHENLDLDL YRGEILAVVG GSGSGKSVLL RSIIGLRRPN 
EGQIKVFGQD LAGLHEEQRS LVERRFGVLF QKGALFSSLT VTENVALPLI EHAGLSRADA
EHLAGVKLAL AGLPISAADK YPASLSGGMI KRAALARALA LDPDILFLDE PTAGLDPIGA
AAFDQLILTL RDALGLSVFL ITHDLDTLYT ITDRIAVLSQ KKVLVAGPLA EVEQTNDAWI
QEYFHGPRGR AAEQAATRAG QER