Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0145 |
Symbol | |
ID | 5867833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 148463 |
End bp | 149251 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641545218 |
Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
Protein accession | YP_001666397 |
Protein GI | 167031166 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.970628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTTTCCA CGCTTAAAAA AACCCTGATT TCCTTTTTGT TGTTGTCTGT CGCCGGTTGC TCGACGGGCC TGCGCATCGA CCGCAGCCAC CCTTCAGCCA ATCAGGACAA CCGCATCCAG TTCGTTGTCC TGCACTACAC CAATGCTTCG CTGGAGCGTT CTCTGGCGTT GCTTACCCAC GGTGAGGTCA GCAGCCATTA CTTGATCGGC GATGGCCCGG CGACGGTGTA TCAACTGGTG GATGAAAACC GTCGTGCCTG GCATGCCGGT GATAGCCAGT GGCAGGGGCG CACCTGGCTG AATTCCTCGT CCATCGGTAT CGAGATCGTC AACCCGGGCT TCACCGACAC CCCGAACGGC CGTGTCTGGC ACCCTTACAG CGAGGCGCAG GTCCAGTCGT TGATCGCGCT GCTCAAGGAC ATCGTCAAAC GCAATAACAT CGAACCCCGC CATATCATCG GCCACAGCGA CATCGCCCCG CTGCGCAAGC TGGACCCAGG GCCATTGTTC CCGTGGAAGC GCCTGGCCGA CGCCGGGCTG GGTATCTGGC CGGATGCCAA CGCGGTTGCA CGGCAGCAGG CCTACTTCAG TGTCAACCCG CCAAGCGTTG GCTGGTACCA GCAGGAACTG GCACGTTTTG GCTATCAAGT CGAACAGACC GGCGTGCTGG ATGTCGCTAC ACGCCATGTG ATCGCTGCCT TCCAGATGCG CTTCCGCCCG CAGCGCTTCG ACGGCATGCC GGATGCGCAG ACAGCCGCGA TGCTGCAGGT GCTCAACCGG ATGCGCTAA
|
Protein sequence | MLSTLKKTLI SFLLLSVAGC STGLRIDRSH PSANQDNRIQ FVVLHYTNAS LERSLALLTH GEVSSHYLIG DGPATVYQLV DENRRAWHAG DSQWQGRTWL NSSSIGIEIV NPGFTDTPNG RVWHPYSEAQ VQSLIALLKD IVKRNNIEPR HIIGHSDIAP LRKLDPGPLF PWKRLADAGL GIWPDANAVA RQQAYFSVNP PSVGWYQQEL ARFGYQVEQT GVLDVATRHV IAAFQMRFRP QRFDGMPDAQ TAAMLQVLNR MR
|
| |