| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0099 |
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| Symbol | |
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| ID | 5867787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 106484 |
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| End bp | 107380 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641545172 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001666351 |
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| Protein GI | 167031120 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000782403 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCACG ACCTCCCTCC CCTGAACGCC CTGCGCGCCT TCGAGGCAAC CGCCAGGCTC
AACAGCGTTA GCCAGGCGGC TGAAGCGCTG CATGTCACCC ATGGTGCAGT CAGCCGGCAG
ATCAAGGTGC TGGAGGAGCA CCTTGGCGTA GCCCTGTTCG TCAAGGACGG GCGTGGCATC
AAACTCACAG ATGCCGGCGT GCGCCTGCGT GATGCCAGTG GCGAGGCTTT CGACCGGCTG
CGCAGCGTGT GTGCCGAACT CAGCCGTGAT GTCAGCGAGG CACCGTTCGT GCTGGGCTGC
TCGGGCAGCC TGCTGGCGCG CTGGTTTATT CCCAGGCTGG GGCGACTCAA GGCGGAATTA
CCTGAATTGC GTCTGCACTT GTCGGCAGGT GAAGGCGACC TCGACCCGCG TCGTCCAGGG
CTCGATGCAT TGCTGGTGTA CGCAGAGCCT CCGTGGCCTG CGGACATGCA GGTGCATGTG
CTGGCCGAAG AGCGTATCGG CCCGGTGCTC AGCCCCCACT TTGCCGGCTT CGAACGCTTG
CGCGGCGCGC CTGTCAGCGC CTTGCTGGAG GAGGCCCTTT TGCATACCAC CTCACGGCCA
CAAGCATGGC CAACCTGGGT TCGGCAGCAG GGGTTGGACC CGGCCGGGTT GCACTATGGC
CAGGCGTTCG AGCATTTGTA TTACTTGCTG GAGGCTGCAG TCGCGGGCCT TGGCGTGGCC
ATTGCGCCGC AGCCGCTGGT GGCGGATGAC TTGAGGGCTG GACGGCTCAG CGCGCCGTGG
GGGTTTTCCC CAACGCGGGC AGCGCTGGCG TTGTGGGTGC CACGGCGCGC CGCGGATGGG
CGCGCCGAGC AACTGGCGCA GTGGCTGCGC CGTGAGTTGC AACGCCAGGC GGGTTAG
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| Protein sequence | MAHDLPPLNA LRAFEATARL NSVSQAAEAL HVTHGAVSRQ IKVLEEHLGV ALFVKDGRGI
KLTDAGVRLR DASGEAFDRL RSVCAELSRD VSEAPFVLGC SGSLLARWFI PRLGRLKAEL
PELRLHLSAG EGDLDPRRPG LDALLVYAEP PWPADMQVHV LAEERIGPVL SPHFAGFERL
RGAPVSALLE EALLHTTSRP QAWPTWVRQQ GLDPAGLHYG QAFEHLYYLL EAAVAGLGVA
IAPQPLVADD LRAGRLSAPW GFSPTRAALA LWVPRRAADG RAEQLAQWLR RELQRQAG
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