| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0094 |
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| Symbol | |
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| ID | 5867782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 102276 |
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| End bp | 103175 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545167 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001666346 |
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| Protein GI | 167031115 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000160709 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGACC ACCTCGCCGA GTTGTCGCTG GATACCTTGC GTGTATTCGA AGCCGCAGCA
CGCCTGCGGG GCTTTACCGC TGCGGCGCTG GCGCTGGGTA CCACGCAGCC GGCCGTGAGC
CAGCAGGTTA AGCGCCTGGA AGCACAGCTG GGCACGCGCC TGTTCGATCG CATTTACCGG
GGCATCGAGT TGACCGAGGC CGGCCAGGTG TTGTTCCAGC AGGTGCACCA GGGCCTGCAG
GCGATGGATG ACGGCATTGC CCAAGCCACC GGTCGCGGCC AGCGCGAGGT GCTGCAGGTG
GCCACCGACT TTGCTTTTGC GGCGTTCTGG CTGATGCCAA GGCTGCAGCG CTTTCATGAG
GCTTATCCAC AGGTGGATGT GAGCCTGGTC ACCGGTGAAC GCAGCCAGGG GATGCTGCGC
CCGGACATCG ATGTGGCGGT GCTTTTCGGT GATGGGCGCT TTCACCAGGG CGAAAGCCGC
TGGCTGTTCG ATGAGGAAGT TTTCCCGGTG TGCAGCCCCC GGCTGACGGA TGGCAAACCC
TTGTCAGCCG TGGCTTTGCA ACGATTGCCC TTGCTGCATT TGAAGGGCGA GCAAGCCAGC
CGCTGGTTTG ACTGGGCGGG GGTGTTTCGC GGGTTTGGTG TGGCCAGCCC GCCGGCGGCG
GGGCAGTTGC GTTTCGACAA CTACACGTTG CTGATTCAGG CAGCGATTGC TGGCCAGGGC
GTGGCGATTG GGTGGGGGCA CTTGGTGGAT AAGTTGGTGG AGCAAGGGTT GCTTTGCCGG
CCTTTGGAGG GGAGTTTGCG CTCGGAGCGT GGGTATTATG CGGTTCTGCC ACCGCGCAAG
CGGCGTGGGG CGCTGATCGA GCGGTTTGTC GGTTGGCTGG AGCATGAGCG CAGCCTTTGA
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| Protein sequence | MFDHLAELSL DTLRVFEAAA RLRGFTAAAL ALGTTQPAVS QQVKRLEAQL GTRLFDRIYR
GIELTEAGQV LFQQVHQGLQ AMDDGIAQAT GRGQREVLQV ATDFAFAAFW LMPRLQRFHE
AYPQVDVSLV TGERSQGMLR PDIDVAVLFG DGRFHQGESR WLFDEEVFPV CSPRLTDGKP
LSAVALQRLP LLHLKGEQAS RWFDWAGVFR GFGVASPPAA GQLRFDNYTL LIQAAIAGQG
VAIGWGHLVD KLVEQGLLCR PLEGSLRSER GYYAVLPPRK RRGALIERFV GWLEHERSL
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