Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0066 |
Symbol | |
ID | 5867754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 71537 |
End bp | 71944 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641545139 |
Product | hypothetical protein |
Protein accession | YP_001666318 |
Protein GI | 167031087 |
COG category | [S] Function unknown |
COG ID | [COG5455] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00784135 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA CCCTAACCGT GATCTGCGCC GCGCTCGTGC TCAGCGCACC ACTGGCCAGC TTCGCGCAGT CAGGCCCACC CGACCGCCAT GATGGCGGCC CATCGCACCA GGGCAATCCG CCACATGGTC AGCCGCAGCA ACAGGGTCGC CATGACAATG GCCGGGGTCC TGCTTACCGT GATCCGAACT TCCACCCACA ACAAGGCATG CCGGTGCCTC ATCAGCAATG GCAGCGTGGT CACGCAGTCG ATCCACATTA CCGGGGTGAC CGTTACTGGG TGACCGACTG GAAAGCGCGT CACCTGTATG CGCCGCCACG TGATCATCGT TGGTTGTATG TGAATGGCGA CTATGTGCTG GTGGCGATTG CCAGCGGTGT GATCGTGAAT ATTCTCAGCG GTTACTGA
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Protein sequence | MKKTLTVICA ALVLSAPLAS FAQSGPPDRH DGGPSHQGNP PHGQPQQQGR HDNGRGPAYR DPNFHPQQGM PVPHQQWQRG HAVDPHYRGD RYWVTDWKAR HLYAPPRDHR WLYVNGDYVL VAIASGVIVN ILSGY
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