Gene PputGB1_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0066 
Symbol 
ID5867754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp71537 
End bp71944 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content60% 
IMG OID641545139 
Producthypothetical protein 
Protein accessionYP_001666318 
Protein GI167031087 
COG category[S] Function unknown 
COG ID[COG5455] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00784135 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAA CCCTAACCGT GATCTGCGCC GCGCTCGTGC TCAGCGCACC ACTGGCCAGC 
TTCGCGCAGT CAGGCCCACC CGACCGCCAT GATGGCGGCC CATCGCACCA GGGCAATCCG
CCACATGGTC AGCCGCAGCA ACAGGGTCGC CATGACAATG GCCGGGGTCC TGCTTACCGT
GATCCGAACT TCCACCCACA ACAAGGCATG CCGGTGCCTC ATCAGCAATG GCAGCGTGGT
CACGCAGTCG ATCCACATTA CCGGGGTGAC CGTTACTGGG TGACCGACTG GAAAGCGCGT
CACCTGTATG CGCCGCCACG TGATCATCGT TGGTTGTATG TGAATGGCGA CTATGTGCTG
GTGGCGATTG CCAGCGGTGT GATCGTGAAT ATTCTCAGCG GTTACTGA
 
Protein sequence
MKKTLTVICA ALVLSAPLAS FAQSGPPDRH DGGPSHQGNP PHGQPQQQGR HDNGRGPAYR 
DPNFHPQQGM PVPHQQWQRG HAVDPHYRGD RYWVTDWKAR HLYAPPRDHR WLYVNGDYVL
VAIASGVIVN ILSGY