Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3648 |
Symbol | |
ID | 4571308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008607 |
Strand | + |
Start bp | 21767 |
End bp | 23107 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639753838 |
Product | outer membrane efflux protein |
Protein accession | YP_899493 |
Protein GI | 118577253 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGAC TTCGCACGCT TGTACTACTG ATATTGATGT TTGTTCCGTC TGCTTTGACA TGGGCAGAAG AACCAAAATT GCCTGCCGAA GACCTGGCAA GCCTTGTTGA CACAGCAATC ACCAACAATC CGGAACTAAA GTCTTCCCAG GCCCGCTGGC AGATGTTCAG GAACAGAATT GCCCAGGCGC GCTCCTTTGA CGATCCGATG CTGATGCTCA AGCTCCAAAA CGGCCTGGTG AACTCCCCCT TCAACTTCAG ACGCGACAGC ATGACCCAGA AGGTTATAGG CCTTAGCCAG CAGATCCCTT TCTGGGGAAA ACGCGGGCTC AAGGAAGAGG TGGCCGCGAA CGATGCCGAG TCGTATCGTT GGCAGGTGGA TGAACGGAGA CTCGAACTCG CCAGGATGGT GAAGGAGACC TACTACCAGA TATTCTTTGC CGATAGATCC CTGGAGATCG TCGCCAAAAA CATCCGGATT CTTGACGACT TCATCACCCT CGCCGAGACC AAGTACGCCG TCGGCCAGGG CGCGCAGCAG GATATCTTCA AATCACAGGT TGAGCGTTCG AAGATGCTCG ACATGAAGAT CTCCCTGGAA CAGGAACGGA AAAGCCTTGT GGCGGCCCTG AATGCCCTGC TCTATCGCTC CCCGGAAACG GCGGTGGGCA GGATTCCCGA CTTCGAGATC CAGCCGTTGC CACTTTCAGC CAGGGATTTG AGGGAAACGG CTCTCAAGAA ACGCCCCATG ATCAAGAGCC TGCAGGCCCT GATCGACAAA GGAGAGGCGG GGCGCAGGCT GGCCAGGAAG GAGTTCTACC CGGACTTCAA CGTCTCCCTG GAATACATGC AGCGCGAGCC GGCCATGGGC AGTGACGGCG CCGACATGTA CAGTCTGGGT GTCACGTTCA ACCTGCCTGT AAGGCGGGAG CGTCGTCATG CAATGGTGGC TGAATCAAAT TCAGAGATCA GTATGGCGAC AGAGGAATTG AACGGCTTGC GGAACACCAT TGATTCCGGC ATTTCCGACC TGCTCGCCAA GCTGGAGAAA CGGGAAAAAC TGGTCATGCT CTTCAAGACC GGCATCATTC CCCAGGCCGA GCAGTCCCTT GAGTCGGCCA CCATCGGTTA CCGCGTCAAC AAGGTCGATT TCCTGAGCCT GCTCGACAGC AGGGTAACCC TGTTCAATTA CGAGCGTGAA CTATACGAGT CCCAAGCTGA GTACATGATG GGGCTGGCAC AGCTCGAAGC GCTTGTCGGC ACCGATCCGG CGATGCCGCA AACGGGACCG GGCAAAGTCC CGACTATCGT ACCTCCCGTG CCGTCCGAGC CTGAACATTG A
|
Protein sequence | MKRLRTLVLL ILMFVPSALT WAEEPKLPAE DLASLVDTAI TNNPELKSSQ ARWQMFRNRI AQARSFDDPM LMLKLQNGLV NSPFNFRRDS MTQKVIGLSQ QIPFWGKRGL KEEVAANDAE SYRWQVDERR LELARMVKET YYQIFFADRS LEIVAKNIRI LDDFITLAET KYAVGQGAQQ DIFKSQVERS KMLDMKISLE QERKSLVAAL NALLYRSPET AVGRIPDFEI QPLPLSARDL RETALKKRPM IKSLQALIDK GEAGRRLARK EFYPDFNVSL EYMQREPAMG SDGADMYSLG VTFNLPVRRE RRHAMVAESN SEISMATEEL NGLRNTIDSG ISDLLAKLEK REKLVMLFKT GIIPQAEQSL ESATIGYRVN KVDFLSLLDS RVTLFNYERE LYESQAEYMM GLAQLEALVG TDPAMPQTGP GKVPTIVPPV PSEPEH
|
| |