Gene Ppro_3621 details

Gene Information

• Locus tag: Ppro_3621
• ID: 4574421
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: -
• Start bp: 4001929
• End bp: 4003815
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639757680
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_903270
• Protein GI: 118582020
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGACGT ACGATTTTGA ATACGATGTA ATCGTGGTTG GTGCCGGCCA TGCCGGCTGC 
GAGGCTGCCT TGGCAGCGGC GCGCATGGGA TGCCGGACAC TGCTCTTGAC CATAAACCTG 
GACGCCATAG CGCTCATGTC GTGCAACCCC TCCATCGGTG GCCTGGCAAA GGGGCATCTC 
GTCAAGGAGA TCGACGCACT GGGTGGCGAG ATGGCACGGA ATATAGACGC CACCGGAATC 
CAGTTCCGCA TTCTCAACAC CAGGAAGGGT CCCGCCGTTC GCGCATCTCG GGCCCAGGCC 
GACAAACAAC TGTATCGCCT GCGCATGAAG CGCGTGCTGG AGAATCAGGA CAACCTTCAT 
CTGAAACAGG GTGAAGTCAC CGCGCTGTAC TGCGACGGCT CTGTCGTTCG CGGCGTGGAT 
ACCCGCTCCG GCATCCGCTT CCTTGGAAAA ACCGTGGTGC TGACGACGGG GACCTTTATG 
CGCGGTCTGA TACATATCGG TCTTACCCAC TATGAAGGGG GTCGCGCCGG GGATCTGCCC 
TCAATCGGGC TGTCCGATCA ACTCAAACAG CTCGGATTGC AGGTGGGCAG GCTTAAGACT 
GGCACACCGG CCAGGCTTGA CGGTCGTACC ATAGATTTTT CCCGGCTGGA ACCGCAGCAT 
GGCGATAATC CGCCGCAGCC GTTCTCTTTC TCCACCGAGC GCATCACCAT GCGTCAGGTT 
CCTTGCCACA TCGCCTACAC CAACGAGCGC TCCCACGACA TCATCCGTTC CGGACTGGAT 
CGTTCCCCGC TCTATGCCGG GATCATCGAA GGCATCGGGC CGCGCTACTG CCCCTCCATC 
GAGGACAAGG TGGTCAGGTT TCCGGATAAG GACCGCCACC AGGCATTTAT CGAACCGGAA 
GGGTTGGATA CGGTTGAGAT GTACCCCAGT GGCATGTCTA CTTCCCTGCC CATCGATATC 
CAGATTGCAT TTTACCGCTC CATGGAGGGT CTGGAGCGGG TCGAGATCAT GCGACCGGCC 
TATGGAATCG AGTACGACTA CGTCGATCCG ATCCAGTTGC ACACCTCTCT GGAGACAAAG 
GCAATCACCA ACCTGTATCA TGCCGGCCAG ATCAACGGCA CTTCGGGCTA CGAGGAGGCT 
GCCGGTCAGG GGATAGTCGC TGGAATCAAC GCTGCCCTGC GCACGCGTGG CGAGGAACCG 
CTGATCCTTT CCCGCAGCGA ATCGTACATC GGTGTCATGA TAGACGACCT GATCACCCTG 
GGGACCAAAG AACCCTACCG CATGTTTACT TCTCGCGCAG AATACCGTCT ATTGCTGCGC 
GAGGACAACG CCGATCAGCG CCTGCGGGAA ATCGGGTATC GGGTGGGACT GGTGTCTGAT 
GCGGAATACG AGGGGTATCT GCGCAAACGG GACATGATTC AGGCTGAACG TGAACGCCTG 
GCTGCCACGC GGATCAGTAT GAGTCAGGCG GAAGAGGAAT ATTTCACGGC CAGGGGATTG 
CCGGATCTGC AGAAGGGAAC CAGCTACGAA CAGCTGCTGC GGCGCCCCGA GATAACCTAC 
GACGATCTGC TCAGTTTCGA CACTGTTTCA CGTGAAACAC CTTCCGTGGT GCGCGAACAG 
GTGGAAATCC AGATTAAATA TCAGGGGTAT ATCGAACGGC AACTGGAGCA GATCCGGCGC 
TCCGCAAAGC TGGAGAACAC CCCCCTACCG ACGGATATGG ATTATGCCGC CATTAACGGC 
CTGACCACCG AAGTGAAGGA AAAGCTGACC AAAGTTCGTC CCGATACGCT TGGCCAGGCC 
TCTCGTATTC CTGGGGTCAC GCCGGCTGCT GTTTCCGTGC TCTCCATTGC CCTCAAGGCC 
CATGCCGGAG CCAGGAAACA GGGATGA 

 

Protein sequence

MMTYDFEYDV IVVGAGHAGC EAALAAARMG CRTLLLTINL DAIALMSCNP SIGGLAKGHL 
VKEIDALGGE MARNIDATGI QFRILNTRKG PAVRASRAQA DKQLYRLRMK RVLENQDNLH 
LKQGEVTALY CDGSVVRGVD TRSGIRFLGK TVVLTTGTFM RGLIHIGLTH YEGGRAGDLP 
SIGLSDQLKQ LGLQVGRLKT GTPARLDGRT IDFSRLEPQH GDNPPQPFSF STERITMRQV 
PCHIAYTNER SHDIIRSGLD RSPLYAGIIE GIGPRYCPSI EDKVVRFPDK DRHQAFIEPE 
GLDTVEMYPS GMSTSLPIDI QIAFYRSMEG LERVEIMRPA YGIEYDYVDP IQLHTSLETK 
AITNLYHAGQ INGTSGYEEA AGQGIVAGIN AALRTRGEEP LILSRSESYI GVMIDDLITL 
GTKEPYRMFT SRAEYRLLLR EDNADQRLRE IGYRVGLVSD AEYEGYLRKR DMIQAERERL 
AATRISMSQA EEEYFTARGL PDLQKGTSYE QLLRRPEITY DDLLSFDTVS RETPSVVREQ 
VEIQIKYQGY IERQLEQIRR SAKLENTPLP TDMDYAAING LTTEVKEKLT KVRPDTLGQA 
SRIPGVTPAA VSVLSIALKA HAGARKQG