Gene Ppro_3595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3595 
Symbol 
ID4574675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3975185 
End bp3976411 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content60% 
IMG OID639757654 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_903244 
Protein GI118581994 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000201785 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAGAC AAAACATCAG CAGGGAAGAA TATCGAACTG CGGCGAGCCC TGGTGGCACA 
CCGGGTGGAA GGGGAATGTC AACCGCGGAC CTTGTGCTCC GCTTCTCCCG TTTCCTGGAA
CATCTGCCCC TGGCGGTTTC CATCAAGGAT CCTTCCGGCC GCTATCTGTT CGTCAACGAG
TACATGAAGC TGCTCATGGA CTGCGAGGAC GTGACCGGCA AGAGCGCCGA GCAGCTTTTT
GCTCCCGATG TGGCCGCGGT CATGGCCGAA AACGATCACC AGGCGCTCGC CCAGGGACTG
CTGCTGGTGC AGTGCACGAT CCGTGACAGC TACGGAGACG ACCGTATCTT CGAGATCTAC
AAGTTTCCCC TGCCCATGCC GGGAGGGGAA ACCCTGCTGG GGAGTGTGGC GGTGGATATC
ACCGAGCGCA AGCGGGCCGA GCAGTCGCTG GCGCTGAAAC AGCAGCAGCT GGAGGAGCTG
AACCGCTCCC TGGAGCAGCG CGTCTCCCAG GCGGTGGACG AACTGCGCCA GAAGGACCGC
TTGCTGATCC AGCAGAGCAG GCAGGCGGCC ATGGGGGAGA TGATCAACAA CATAGCCCAC
CAGTGGCGCC AGCCGCTGAA CAACATCGGC CTGATCATCC AGAACCTGCA ATTGCAGTAT
GAAGCGGGTG AGATGGATGC CCAGCAGATG GCAGCGGAAG TCGGCACCGC CATGGACGTC
ATCGCCTTCA TGTCCCGGAC CATCGACGAT TTCCGCAACT TCTTCCATCA GGACAAGCTG
CGCAGGAGTT TCGTGGTAAA CGAGATGGTG GCCCGTTCGC TGGATTTCCT GCTTCCCGGC
CTGAAGAACA GCGGCATCAA CGTCCAGTGT CGGGAGGAGC CGGACGTCAG GACGGAGGGA
TACCCCAGCG AATACATGCA GGCGCTGCTC AACATCCTCA ACAATGCCAA GGATGTGCTG
CTGGAGCGCA GGGTGCCCCG GCCGTTGATC TGTATCACTA TATTCCGGGA GAACCGGCGT
GCGGTGGTCA CCATCCGCGA TAACGGAGGC GGCATCCGCG AAGATGTGCT GCCCAGGATA
TTCGATCCCT ATTTCACGAC CAAGGAGCAG GGCAAGGGTA CCGGCATCGG TCTGTACATG
TCCAAGGCCA TCATCGAGAA GAGCTTCGAG GGGAGGCTTA CGGCCCGCAA CATGGATGAC
GGCGCGGAGT TCAGGATCGA GGTCTGA
 
Protein sequence
MHRQNISREE YRTAASPGGT PGGRGMSTAD LVLRFSRFLE HLPLAVSIKD PSGRYLFVNE 
YMKLLMDCED VTGKSAEQLF APDVAAVMAE NDHQALAQGL LLVQCTIRDS YGDDRIFEIY
KFPLPMPGGE TLLGSVAVDI TERKRAEQSL ALKQQQLEEL NRSLEQRVSQ AVDELRQKDR
LLIQQSRQAA MGEMINNIAH QWRQPLNNIG LIIQNLQLQY EAGEMDAQQM AAEVGTAMDV
IAFMSRTIDD FRNFFHQDKL RRSFVVNEMV ARSLDFLLPG LKNSGINVQC REEPDVRTEG
YPSEYMQALL NILNNAKDVL LERRVPRPLI CITIFRENRR AVVTIRDNGG GIREDVLPRI
FDPYFTTKEQ GKGTGIGLYM SKAIIEKSFE GRLTARNMDD GAEFRIEV