| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3537 |
|---|
| Symbol | |
|---|
| ID | 4574619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3908801 |
|---|
| End bp | 3910792 |
|---|
| Gene Length | 1992 bp |
|---|
| Protein Length | 663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639757596 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with GAF sensor |
|---|
| Protein accession | YP_903187 |
|---|
| Protein GI | 118581937 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.644926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA GTCCCATGAC AAGGCACGCC ACCCTCTTCT CCCTGATCGG TTTCATGCTG
GGCATCGGCG CGCCCGTCGG TTGGATCGTC CTGAGGCTGC TGCTGTTCCG CACAGGCGGT
AAGCCGCTCG TGGAGCAGGC GCTGGGTGAC ATCCTGCTGA GTGGCGAGCA TCTCGCCCTC
TACGCATACA TGGGGATCGG CACGGCCCTG GTTCTTGCTC TGCTCGGCTT CCTGATCGGT
TCCTACGGCG ACGAACGGCG CAGGCGCTCC GCCGAACTGG CCCAGCTCCA CCGGGAAGTC
GCCTCCCAGA AGGACCTCTT CCAGAACCGC TACCAGGTGC TGGACAACAA CATTAAGAAC
TTCCATCACA TCAGCAGCAA AATCCAGACC TCGCTCAACC TGGAGGAGAT CCTGCTGCTC
TGCGCCGAGG GGCTGCACGA AATCCTGGGG TACGAACGGG TCAACATCCT GATGACCCAG
CATGGCCAGC GGATCCGCTT CGTCACCGCC ACCGGAAGCG ACAGCTTCGA CATAACCGGC
GTCACCCTGC CGCTGGATCC CTCCATCGGC GTCATCTACA AGTGCCTCAG CGAGAAGAAG
GTCTTCCTGA TCGACGACAT CTCGCGCTAT CCCCAGGATT ACCAGATCCA GGAACCGCAC
CGTCGCCAGG CTCCCCTCCG CTCGCGCAGC TTCATCCTCT GCCCCATCGT GGTCAAGGGG
GAGGCCATCG GCGCCTTCGG CATCGACAAC AAGACCAGCA AACGCGCCCT GAACGACTCG
GACGTGGACA CCATCATGCT CTTCGCCGAC CAGGTGGCAT CGGCCATTAC CCGCATCAAC
CTGCTCACCT CCATCGATGC CCTGACCAGC GAACTGGAGA ATTCCTTCGC CTTCCTGCTG
GGCAGTCGGC CGGAGTATTC GCGCAACGTC GTTGAGCTGA AGGAGGCGGT GGATTCGGTG
GCCGAGGGGT CTGGCGCCAT AGCCTCCGCA TCCGAGGGGG TCATGGCGGC GGTTGACGAG
ACCGGCATGG CCGTCAACGA GATCTCCGTG GCCATCGAAC AGGTGACCCG CAACCTGGAC
CACTTGGCCG GAATTGTGCG GCAGTCCGCG GCGGCCATGG AGGGGATCAC CAGAACCATC
AACAACGTGG AACAGAGCGC CGCCATCTCC CATGAGGTCT CCAGCCAGGT CAAGTCCCGG
GCCGACGAGA GCTTCAGCGT GGTCACCGAA ACGATCAATT CCCTGGCCGA GATCCAGTCC
TCGGTCGAGC TCTCCTATAC GGCAATCAGC CGTCTGGCGG AGAACAGCGC CCGCATCGAA
AACGTCGTCA ACGTTATCAA CGACATCACC AAGCGCACCA ATCTTTTGGC CTTCAATGCC
GCCATCATCG CGGCCCAGGC CGGGGAGTAC GGCAAGAGCT TCGGCGTCGT GGCCGACGAG
ATCCGCAACC TGTCGCTGCA GACCGGCCAC TCCACCGGCG AGATCACCGG CATCATCAAA
GAGATCCTGT CCGAGTCCCG CACCGCCGCC GACAACATCA CCGCCAGCAA AGAGCTTGTC
CAGCGCGGCG TGGAGCTGGG CTCCTCCACG GGCGAGGCGC TCAGGGCGAT CCACGACAGT
TCGGCCTGCT CCATGGACAT GACCCAGCAG ATCAAACAGG CCACCCGGGA ACAGGTGGCC
AGTGTCCGTA TGGTGGCCAC CTCCATGGAA GAGATCAGCT CCATGACATC CCAGATACTG
GCGGCTTCAG CGGATCAGGC CAAGGCGACC CGCAGCATTG CCCGCTCCAT CGAAACCATC
ACCGAGATGG CCCACGAAAT GGTCGATTCA ACCTCCCGCC AGGTGCGGGA TGGCCACCAG
ATCCGCCACT CCGTGGAGTC GGTCAGCGAC ATGGTCAGGG AGATGTTCGA CAACATGGAA
CAGCGCCGCA ACCAGAGCGC GGAGGTGGTC AAGGACCTGG AGTCCATGAA GAACCTCACC
TGCCAACTCT GA
|
|---|
| Protein sequence | MSTSPMTRHA TLFSLIGFML GIGAPVGWIV LRLLLFRTGG KPLVEQALGD ILLSGEHLAL
YAYMGIGTAL VLALLGFLIG SYGDERRRRS AELAQLHREV ASQKDLFQNR YQVLDNNIKN
FHHISSKIQT SLNLEEILLL CAEGLHEILG YERVNILMTQ HGQRIRFVTA TGSDSFDITG
VTLPLDPSIG VIYKCLSEKK VFLIDDISRY PQDYQIQEPH RRQAPLRSRS FILCPIVVKG
EAIGAFGIDN KTSKRALNDS DVDTIMLFAD QVASAITRIN LLTSIDALTS ELENSFAFLL
GSRPEYSRNV VELKEAVDSV AEGSGAIASA SEGVMAAVDE TGMAVNEISV AIEQVTRNLD
HLAGIVRQSA AAMEGITRTI NNVEQSAAIS HEVSSQVKSR ADESFSVVTE TINSLAEIQS
SVELSYTAIS RLAENSARIE NVVNVINDIT KRTNLLAFNA AIIAAQAGEY GKSFGVVADE
IRNLSLQTGH STGEITGIIK EILSESRTAA DNITASKELV QRGVELGSST GEALRAIHDS
SACSMDMTQQ IKQATREQVA SVRMVATSME EISSMTSQIL AASADQAKAT RSIARSIETI
TEMAHEMVDS TSRQVRDGHQ IRHSVESVSD MVREMFDNME QRRNQSAEVV KDLESMKNLT
CQL
|
|---|
| |